• 学术搜索
  • 科研智能体
    • Research Labs
    • AI 阅读
    • AI 文库
    • 深度研究
    • 学者亮点
  • 学术资源
    • AI2000
    • 期刊/会议
    • 学者库
    • 学术API
    • 溯源树
    • 数据集
  • 知识沉淀
    • 学术空间
订阅小程序
旧版功能
aminer vip
开通会员低至0.73元/天
一次搞定AI科研
立即登录
  • English
  • 联系方式
    Biology direct

    Biology direct

    JournalISSN 1745-6150eISSN 1745-6150中科院 生物学 2区

    年发文量

    研究主题

    论文(1401)

    排序
    1NewVCAM-1 Promotes Colorectal Cancer Progression and Metastasis Via the RhoA/LIMK/Cofilin Pathway
    Qian Zhang, Abuduweili Wufuer, Zanlin Li, Tao Hong, Zhi Wang

    Vascular cell adhesion molecule-1 (VCAM-1) has been implicated in tumor progression, but its role and molecular mechanisms in colorectal cancer (CRC) remain incompletely defined. This study investigated the clinical association and functional mechanisms of VCAM-1 in CRC. Immunohistochemistry using a tissue microarray containing 90 CRC samples showed that VCAM-1 expression was higher in CRC tissues than in adjacent non-tumorous tissues. Reanalysis of the original survival dataset showed that VCAM-1 positivity was associated with better overall survival in this cohort, whereas its associations with most clinicopathological variables were not statistically significant. This survival association should be interpreted cautiously and requires validation in larger independent cohorts. In vitro, VCAM-1 knockdown in HCT116 and SW480 cells suppressed proliferation, migration, and invasion and promoted apoptosis. Mechanistically, VCAM-1 depletion inhibited RhoA/LIMK/Cofilin signaling, reduced F-actin organization and fluorescence intensity, and reversed epithelial-mesenchymal transition (EMT)-related changes; RhoA-Q63L expression partially restored downstream signaling, cytoskeletal organization, migration, and invasion. VCAM-1 also contributed to CRC cell adhesion to endothelial cells and migration in an M2 macrophage co-culture setting. In vivo, stable VCAM-1 knockdown in HCT116 cells reduced tumor growth in a subcutaneous model. In a tail-vein BLI model, the same knockdown decreased whole-body experimental colonization burden. Together, these findings suggest that VCAM-1 may promote CRC cell progression through RhoA/LIMK/Cofilin-related cytoskeletal remodeling and tumor microenvironment-associated interactions. However, the clinical prognostic direction observed in the current cohort differs from the tumor-promoting functional findings, and the prognostic and therapeutic relevance of VCAM-1 should be further evaluated in larger studies.

    2026
    引用
    AI阅读
    加入学术空间
    2NewHSP90B1 Exacerbates Myocardial Infarction Injury by Promoting Cardiomyocyte Pyroptosis and is Associated with M1-like Macrophage Polarization
    Yemin Wang, Jiaqian Ge, Ying Zhang, Keke Shi, Jianrong Bao, Mingxiu Dai, Xiaopeng Zhang, Xuexue Liu, Jiaqian Lin, Zilong Tang,Lei Sun,Xiao Yu

    Excessive inflammation contributes to adverse cardiac remodeling after myocardial infarction (MI), but the mechanisms linking cardiomyocyte injury to immune activation remain incompletely understood. Here, we investigated the role of the endoplasmic reticulum chaperone HSP90B1 in cardiomyocyte injury and inflammatory crosstalk after MI. We examined HSP90B1 expression in human myocardial tissues, mouse MI hearts, and oxygen-glucose deprivation (OGD)-treated AC16 cardiomyocytes. Hsp90b1+/− mice were used to evaluate post-MI survival, cardiac function, and myocardial remodeling. HSP90B1 was selectively silenced or overexpressed in AC16 cardiomyocytes, and transcriptomic and pharmacological analyses were performed to investigate the signaling pathways involved. A non-contact Transwell co-culture system was also established to assess the effects of cardiomyocyte HSP90B1 on macrophage inflammatory activation. HSP90B1 was increased in human and mouse myocardial tissues after MI and in OGD-treated AC16 cardiomyocytes. Hsp90b1+/− mice showed improved post-MI survival, preserved cardiac function, and reduced adverse remodeling. In AC16 cardiomyocytes, HSP90B1 promoted OGD-induced pyroptosis and was associated with activation of NF-κB/NLRP3 signaling, whereas pharmacological inhibition of these pathways reduced pyroptosis-related responses. In a non-contact cardiomyocyte–macrophage co-culture system, cardiomyocyte HSP90B1 expression influenced the pro-inflammatory phenotype of macrophages. Our findings identify HSP90B1 as a key regulator of cardiomyocyte pyroptotic signaling and post-MI inflammatory remodeling, with cardiomyocyte HSP90B1 expression associated with M1-like macrophage polarization.

    2026
    引用
    AI阅读
    加入学术空间
    3NewA Non-Metabolic Function of Hexokinase 2 in Colorectal Cancer: HK2 Promotes Malignant Phenotypes by Facilitating UBE3A-Dependent ZNF366 Degradation
    Zhen Jia,Xinlong Liu,Li Zhao, Hanbing Wang, Yihang Liu, Shuang Liu, Mei Jia, Bingqian Heng, Jiaxu Fan,Yabin Liu,Peng Kong,Dexian Kong

    Hexokinase 2 (HK2), a key enzyme in the Warburg effect, is associated with poor prognosis in colorectal cancer (CRC). HK2 is known to exert glycolysis-independent functions, yet the underlying targets and mechanisms remain unclear. This study aims to investigate the functional role of ZNF366 as a direct target of HK2 in colorectal cancer and reveal a non-metabolic function of HK2 in CRC. HK2-binding proteins were identified by immunoprecipitation and mass spectrometry. ZNF366 expression was assessed by western blotting and qRT-PCR. Cell proliferation, invasion, and migration were evaluated by functional assays. In vivo tumor growth was examined using a xenograft model. Molecular mechanisms were dissected by co-immunoprecipitation and ubiquitination assays. ZNF366 is downregulated in CRC tissues and cells. Overexpression of ZNF366 suppresses cell proliferation, invasion, and migration in vitro, and inhibits tumor growth in vivo, accompanied by decreased levels of pERK1/2, Cyclin D1, and MMP9, whereas ZNF366 knockdown increases their expression, indicating a negative regulatory role of ZNF366 on malignant phenotypes. HK2 and ZNF366 protein levels are inversely correlated in CRC specimens. HK2 reduces ZNF366 protein levels without affecting its mRNA expression. Mechanistically, UBE3A is identified as the E3 ubiquitin ligase for ZNF366. HK2 enhances the interaction between ZNF366 and UBE3A, leading to increased polyubiquitylation and degradation of ZNF366, which in turn correlates with enhanced malignancy of CRC cells. Our findings suggest that HK2 facilitates UBE3A-dependent ZNF366 degradation, which may partially contribute to the tumor-promoting effect of HK2, revealing a novel HK2-UBE3A-ZNF366 regulatory axis that provides insights into the non-metabolic functions of HK2 in CRC.

    2026
    引用
    AI阅读
    加入学术空间
    4NewMetabolism-related Post-Translational Modifications in Nucleus Pulposus Cells During Intervertebral Disc Degeneration
    Leyi Zhao, Lei An,Yuxing Ye, Junming Liang,Shaobo Wu,Dageng Huang

    Intervertebral disc degeneration (IVDD) is a progressive, multifactorial disorder in which nucleus pulposus (NP) cells operate within chronic hypoxia, nutrient limitation, acid stress and mechanical loading. Metabolites in this niche are not only substrates for energy production but also signaling molecules and donors or regulators of covalent protein modifications. Metabolism-related post-translational modifications (mrPTMs), including lactylation, O-GlcNAcylation and succinylation, provide a molecular interface between metabolic state and protein activity, stability, localization and turnover. Recent studies in IVDD have linked these modifications to ferroptosis, oxidative stress, mitochondrial dysfunction, endoplasmic-reticulum and autophagic quality control, senescence and extracellular-matrix disruption, while crotonylation, glutarylation, β-hydroxybutyrylation and itaconate-related modifications remain emerging areas. However, donor abundance, modifying-enzyme activity, global modification signals, site occupancy and protein abundance are often assessed separately, and direct PTM crosstalk in NP cells remains incompletely resolved. Here, we synthesize current evidence using a framework that connects the metabolic and mechanical microenvironment with metabolic inputs, modifying enzymes, substrate sites, cellular processes, NP cell dysfunction and IVDD. We distinguish site-resolved evidence from candidate mechanisms, integrate established interventions with substrate-selective and local-delivery strategies, and outline priorities for flux-resolved, site-resolved and clinically translatable research.

    2026
    引用
    AI阅读
    加入学术空间
    5NewCRISPR–Cas Diversity in Microcoleus Genomes Reveals a Dynamic History of Gene Flow and Mobile Genetic Element Interactions
    Barbora Hájková, Aleksandar Stanojković, Svatopluk Skoupý, Petr Dvořák

    The filamentous cyanobacterial genus Microcoleus is globally distributed and plays an important role in biological soil crusts. CRISPR–Cas immunity is a prokaryotic defense mechanism that mediates interactions with mobile genetic elements, and may thereby contribute to genome evolution. Yet, its diversity and evolutionary significance in cyanobacteria remain poorly understood. Here, we integrate CRISPR–Cas locus identification, phylogenetic analyses, genome and environmental association analyses and spacer target search to examine CRISPR–Cas diversity and evolution across 14 Microcoleus species. We found that CRISPR–Cas systems are widespread in Microcoleus genus, but their distribution does not follow species-level phylogeny. Instead, locus heterogeneity and module-specific evolutionary histories indicate repeated gain, loss and exchange of CRISPR–Cas components, suggesting that gene flow has contributed to their diversification. CRISPR spacer composition and sharing patterns further indicate dynamic exposure to mobile genetic elements, potentially linked to environmental context. Although a large proportion of spacer targets remain unidentified, expanded protospacer searches revealed plasmid-like elements as prominent targets among the identifiable sequences. Together, our results suggest that CRISPR–Cas systems in Microcoleus are highly dynamic and reflect interactions between gene flow, mobile genetic elements and environmental context, highlighting their potential role as variable components of cyanobacterial genome evolution.

    2026
    引用
    AI阅读
    加入学术空间
    立即登录,查看全部 1401 篇论文

    高被引作者

    作者引用发文
    Eugene Koonin902272
    Yuri I. Wolf455527
    Kira S. Makarova407123
    Aravind Iyer258620
    Lakshminarayan M. Iyer143312
    Gajendra P.S. Raghava12887
    Vivek Anantharaman12697
    Nick Grishin12473
    Natalya Yutin124710
    Svetlana A. Shabalina10921

    高产作者

    作者引用发文
    Eugene Koonin902272
    Gerry Melino40431
    Yuri I. Wolf455527
    Kira S. Makarova407123
    Aravind Iyer258620
    Eleonora Candi11716
    Lakshminarayan M. Iyer143312
    Frank Eisenhaber39611
    Igor B. Rogozin93911
    Alessandro Mauriello7410

    相关期刊

    Biochemistry and cell biology = Biochimie et biologie cellulaire
    Experientia
    Molecular and cellular biology
    Molecules and cells
    Cell communication and signaling : CCS
    BMB reports
    Science signaling
    Wiley Interdisciplinary Reviews-RNA
    Non-coding RNA
    BMC molecular and cell biology