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    Methods in Microbiology

    Methods in Microbiology

    JournalISSN 0580-9517中科院 生物学 4区

    年发文量

    研究主题

    论文(26466)

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    1Nucleic Acid Extraction and Quality Assessment from Rhizosphere Samples
    Alina Escalante-Beltrán, María Edith Ortega-Urquieta, Pamela Helué Morales-Sandoval,Fannie Isela Parra-Cota,Sergio de los Santos-Villalobos
    2026
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    2Screening of Hyperthermostable Proteins from Hyperthermophilic Archaeon Palaeococcus Pacificus DY20341T
    Junxi Hu, Jing Zhang, Jiaju Xu,Xiang Zeng

    Palaeococcus pacificus DY20341T, a hyperthermophilic archaeon from deep sea hydrothermal sediments, grows at temperature range from 50 to 90 ℃ (Topt = 80℃). To explore the molecular basis of its thermal adaptation, we identified six representative hyperthermostable proteins from its cytosolic fraction that remained soluble after a stringent in vitro heat treatment at 100 °C. MALDI-TOF mass spectrometry identified these as an inorganic pyrophosphatase (PPase), a 5’-methylthioadenosine phosphorylase (MTAP), and four putative transporter components (one TRAP and three ABC transporter solute-binding proteins). RT-qPCR analysis revealed that the transcription of all six corresponding genes was significantly upregulated when the growth temperature was elevated from 80 °C to 90 °C, suggesting a potential role in the cellular response to heat stress. Biochemical characterization of the recombinant PPase demonstrated remarkable thermostability and an optimal temperature of 90 °C. Kinetic analysis revealed high catalytic efficiency, with a maximal specific activity of 590 ± 30 U/mg and a strong substrate affinity ( K_m = 6.24 µM). Phylogenetic analysis of the identified thermostable MTAP (PAP_00250) revealed its evolutionary origin from hyperthermophilic archaea, distinguishing it clearly from a second MTAP homolog (PAP_07050) in the genome, which aligns with mesophilic bacteria. The structural stability of the identified ABC and TRAP transporter components hypothesizes that efficient nutrient scavenging remains critical at extreme temperatures. Together, these findings provide valuable insights into the stable molecular machinery and potential physiological strategies enabling P. pacificus to thrive in hydrothermal environments.

    2026
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    3Zinc Cadmium Sulfide Nanocrystals Prepared in PAM Water-Soluble Nanoreactors and Their Photocatalytic Performance in Photodegradation
    Ketao Xia, Zhenqian Zhang,Bijun Fang, Ranhong Lu

    The ZnxCd1-xS nanocrystals with different Zn2+/Cd2+ratios were solvothermally incubated in water-soluble nanoreactors formed by inverse miniemulsion. Notably, Zn0.5Cd0.5S nanocrystals with larger grain sizes were obtained from polyacrylamide (PAM) nanoreactors, where the PAM solution served as a key component for precursor ripening. The miniemulsion-derived nanoreactors remained stable during nanocrystal incubation, with a size of approximately 160 nm. The obtained ZnxCd1-xS nanocrystals exhibited a cubic structure, and their band gap (Eg) was tunable from 3.83 eV (x= 1) to 2.64 eV (x= 0). The catalytic performance of the nanocrystals was optimized by adjusting both the Zn2+/Cd2+ratio and the PAM concentration in the nanoreactors. Specifically, Zn0.5Cd0.5S nanocrystals incubated in nanoreactors containing 10.0 mg g-1PAM achieved an enhanced grain size of 15 nm, displaying a tunable band gap of 2.58 eV and a weaker luminescence intensity. These nanocrystals exhibited the best catalytic degradation efficiency by balancing the light absorption and the photogenerated charge redox ability, thereby providing a selective strategy for the design of the advanced semiconductor materials.

    2026
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    4Observation of an Anomalously Broadened Donor-Induced Excitonic Emission of CdSe/ZnSe Submonolayer Quantum Dots.
    J C Basilio-Ortiz, F Sutara, I Hernández-Calderón

    Epitaxial CdSe/ZnSe submonolayer quantum dots (SMQDs), formed from CdSe coverages below one monolayer (ML), often exhibit a double-peak excitonic structure in their photoluminescence spectra. The narrower, higher-energy peak corresponds to excitons localized within the SMQDs. The lower-energy peak is broader, which is not typical of donor-bound excitons, and has therefore been attributed in previous studies to morphological features of the quantum dots. The identification of the origin of the low-energy peak is technologically relevant for quantum applications of the SMQDs. To clarify the origin of this excitonic structure, we grew several CdSe SMQDs samples with nominal coverages of 0.5 and 0.25 MLs embedded in both non-intentionally doped and Cl-doped ZnSe barriers. The heterostructures were systematically characterized by photoluminescence spectroscopy. A direct comparison of the excitonic properties of the CdSe SMQDs samples grown within ZnSe barriers with varyingn-type impurity doping clearly demonstrates that the relative intensity and line shape of the lower-energy peak depend strongly on donor concentration. These findings overturn the previous morphological interpretation and conclusively demonstrate that the lower-energy component originates from donor impurities. It corresponds to localized excitons bound to single or multiple neutral donors and/or to negative trions formed at low temperature. The intensity in both cases depends on donor doping level.

    2026
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    5Aging-induced Nanocrystalline Boundary Coalescence in Solution-Process Synaptic Memristor.
    Lingyu Xie, Lehang Chu, Yanhong Zhang, Haoyu Shen, Junming Xu, Yijie Gu,Jie Jiang,Liang Chu

    Aging-induced contact enhancement is a prominent natural phenomenon in materials science. However, it has often been overlooked in nanocrystalline films. Herein, we developed a NiOx/SnO2p-n heterojunction synaptic memristor based on NiOxand SnO2nanocrystals inks, where aging-driven nanocrystal boundary coalescence serves as the origin of improved memristive switching and synaptic emulation. SnO2nanocrystals with amorphous surfaces undergo gradually boundary coalescence after film formation to strengthen bonding between nanocrystals. The ITO/NiOx/SnO2/Ag device exhibits enhanced memristive behavior with aging time at room temperature, and thermal treatment accelerates this aging process. The device emulates synaptic functions of long-term potentiation/depression, excitatory/inhibitory postsynaptic current, and short-term/long-term memory. This work elucidates how aging-driven nanocrystalline evolution facilitates the low-cost fabrication of high-performance neuromorphic devices via solution processing and thermal acceleration.

    2026
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    高被引作者

    作者引用发文
    Miguel Jose Yacaman906410
    José Rubén Morones Ramírez88771
    José Tapia-Ramírez88771
    Katherine B. Holt88771
    Jose Luis Elechiguerra88771
    R. Stanley Williams851731
    Seeram Ramakrishna696823
    Darrell H. Reneker58445
    I Chun51871
    Duncan Stewart49857

    高产作者

    作者引用发文
    Sergei V. Kalinin280353
    Lars Samuelson271347
    Wenzhong Shen130543
    Stephen Jesse197741
    Samit Kumar Ray134238
    Zhong Lin Wang311737
    Chennupati Jagadish172137
    Takhee Lee217337
    Luiz H. Rosa110837
    Bingsuo Zou131835

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