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    New Biotechnology

    New Biotechnology

    JournalISSN 1871-6784eISSN 1876-4347中科院 生物学 2区

    年发文量

    研究主题

    论文(5716)

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    1NewBiosynthesis of 4-Hydroxyvalerate from Glycerol in Engineered Pseudomonas Putida KT2440 and Its Application for the Production of Poly(3-hydroxybutyrate-co-3-hydroxyvalerate-co-4-hydroxy Valerate) (P(3hb-Co-3hv-co-4hv)) Terpolymer.
    Gaeun Lim,Hyun Jin Kim, Seung-Hun Lee, Tae Yun Kim, Gun Woo Doh,H. Kim,Hyun June Park,Kwon-young Choi, S. Bhatia,Yung-Hun Yang

    The 4-hydroxyvalerate (4HV) is a key intermediate that serves as a precursor for γ-valerolactone (GVL) and terpolymers, contributing to the synthesis of liquid fuels and biodegradable plastics with improved properties. While 4HV is typically derived from levulinic acid (LA) via chemical catalysis, these methods are limited by high costs and operational complexity. In our previous study, we designed an engineered Pseudomonas putida KT2440 with double knockout of pcaIJ and lvaR and introduction of aroG, asbF, and adc, enabling high production of LA from glycerol. Herein, we introduced acyl-CoA synthetase gene (lvaE) and 4-hydroxyvaleryl-CoA dehydratase gene (lvaD) into LA producing strain to construct a 4HV production pathway from glycerol. The strain harboring both lvaD and lvaE consumed the highest amount of LA, and, subsequently, showed the highest 4HV production. In fed batch fermentation, P. putida KT2440 HP403 produced 28.77mM of 4HV from glycerol. To expand its potential applications as a PHA precursor, biologically synthesized 4HV was supplied to the high-performing PHA producer Cupriavidus necator PHB-4/phaCBP-M-CPF4 for polymer synthesis. This produced a terpolymer with the composition P(54.49mol% 3HB-co-6.98mol% 3HV-co-38.53mol% 4HV) with a PHA content of 60.21%. The terpolymer exhibited improved elongation at break and lower glass transition and crystallization temperatures due to increased amorphicity. This study suggests a 4HV bioconversion strategy derived from glycerol by engineered P. putida KT2440 HP403 and demonstrates the production of a high-content P(3HB-co-3HV-co-4HV) terpolymer in C. necator containing high-mole fraction of 4HV, thereby providing a new sustainable approach for PHA production.

    2026
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    2NewThe E. Coli Lite Strains: New Expression Strains for the Production of Toxic Membrane Proteins
    Alexandra E. Trigg, Parisa Pordelkhaki, Ksenia M. Klimova, Adam T. Wood,Joanne Hothersall,Stephen J.W. Busby,Tim W. Overton,Douglas F. Browning

    The production of recombinant biopharmaceuticals is a billion-dollar industry, with numerous high-value proteins expressed in the bacterium Escherichia coli. Many recombinant protein production (RPP) systems enable the synthesis and purification of large amounts of soluble recombinant protein. However, such systems are often too strong to allow the expression of difficult-to-fold proteins, such as membrane proteins, with high-level RPP resulting in the production of insoluble aggregates (i.e., inclusion bodies), target protein degradation and even cell death. To aid the production of problematic proteins, we have engineered the E. coli lite strains in which the plasmid copy number regulator pcnB has been disrupted to allow expression levels of protein targets to be immediately lowered. Using the E. coli lite strains, we express a variety of proteins including green fluorescent protein (GFP), human growth hormone (hGH) and three toxic membrane proteins (BamAENm, LetBEPEC and YiaM). We show that the E. coli lite strains are able to substantially lower the expression of target proteins and alleviate the cellular toxicity associated with producing membrane-localised proteins. Additionally, we show that the E. coli lite strains are extremely versatile, functioning with a variety of RPP systems, including lac-, T7 RNA polymerase- and paraBAD-based systems, and operate under different expression and growth regimes. Thus, the E. coli lite strains can be used to quickly lower expression levels of complicated target proteins to improve both protein production and cell growth.

    2026
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    3NewEngineering Sticky Microbes: A Framework for Appraisal of Microbial Cell-Cell Adhesion
    Karin Schann,Elena Algar, Magnus Haahr, Christopher S. Miller,Víctor de Lorenzo,Esteban Martínez-García
    2026
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    4NewHost Physiological Constraints Limit Microbial Production of Partially Acetylated Chitooligosaccharides
    Sofie Snoeck, Hamza Malik,Wouter Demeester,Dries Duchi, Wies Lips,Chiara Guidi,Bruno M. Moerschbacher,Marjan De Mey
    2026
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    5NewRare Earth Element Biosensing in Chemically Complex Waters: Interference Mechanisms, Operating Windows, and Mitigation for a Lanmodulin Enzymatic Switch
    Luke J. Webster, Joshua Brown, Rosemary Gillane,Kirill Alexandrov,Zhong Guo, Zhenling Cui,Denys Villa Gomez

    Rare earth elements (REE) are increasingly mobilised from mine residues and other industrial sources, creating a need for rapid screening of chemically complex waters where conventional ICP-based analysis is impractical on site. Here, we evaluate a lanthanide-gated enzymatic switch biosensor, for matrix-aware monitoring of mine-influenced waters. We quantified REE-dependent activation and systematic interference from co-occurring metals and anions typical of mine waters, and defined operating windows that preserve lanthanide responsiveness. REE activation was readily detectable at ~100 nM, whereas inhibition emerged in the low-micromolar range and became pronounced near ~10 µM for key interferents, corresponding to a practical tolerance of roughly 1:100 (REE:inhibiting element). Inhibition was strongest for AlIII, FeIII, GaIII, ZnII, and SnII. Combined machine learning, molecular dynamics, and density functional theory analyses indicate distinct inhibition modes, including coordination of FeIII, ZnII, and SnII at the LanM EF4 hand loop and favourable binding of [Al(OH)4]-/[Ga(OH)4]- near the TEM-1 substrate-recognition region. Consistent with these predictions, citrate reduced inhibition from hydrolysing metals, especially AlIII and SnII. Together, these findings define matrix-dependent operating envelopes, mechanistic design rules, and practical mitigation strategies for deploying REE biosensors in chemically complex waters.

    2026
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    高被引作者

    作者引用发文
    Fabio Fava212726
    M.A. Reis149127
    Spyridon Agathos14326
    Maria Gavrilescu13984
    Kateřina Demnerová10782
    Jens Aamand10391
    Anne S. Meyer97215
    Mauro Majone92920
    Wilhelm J. Ansorge8991
    Fabian Grubert7031

    高产作者

    作者引用发文
    Diethard Mattanovich15032
    M.A. Reis149127
    Fabio Fava212726
    Georg Gübitz67725
    Nicole Borth26920
    Mauro Majone92920
    Jozef Samaj6917
    Raul Rivas1016
    Ebru Toksoy Oner7316
    Louise Horsfall21715

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