Kenneth J. Livak | AMiner学者主页

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200520212022

论文（113）

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1Suppl. Fig. 1 from Tracking Rare Single Donor and Recipient Immune and Leukemia Cells after Allogeneic Hematopoietic Cell Transplantation Using Mitochondrial DNA Mutations

Livius Penter,Nicoletta Cieri,Katie Maurer,Marwan Kwok,Haoxiang Lyu,Wesley S. Lu,Giacomo Oliveira,Satyen H. Gohil,Ignaty Leshchiner,Caleb A. Lareau,Leif S. Ludwig,Donna S. Neuberg,

Extraction of mitochondrial DNA mutations from bulk RNA-seq data in CLL.

2026

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2Suppl. Fig. 19 from Tracking Rare Single Donor and Recipient Immune and Leukemia Cells after Allogeneic Hematopoietic Cell Transplantation Using Mitochondrial DNA Mutations

Livius Penter,Nicoletta Cieri,Katie Maurer,Marwan Kwok,Haoxiang Lyu,Wesley S. Lu,Giacomo Oliveira,Satyen H. Gohil,Ignaty Leshchiner,Caleb A. Lareau,Leif S. Ludwig,Donna S. Neuberg,

Identification of high-confidence mitochondrial DNA mutations for Tapestri analysis.

2026

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3Suppl. Table 8 from Tracking Rare Single Donor and Recipient Immune and Leukemia Cells after Allogeneic Hematopoietic Cell Transplantation Using Mitochondrial DNA Mutations

Livius Penter,Nicoletta Cieri,Katie Maurer,Marwan Kwok,Haoxiang Lyu,Wesley S. Lu,Giacomo Oliveira,Satyen H. Gohil,Ignaty Leshchiner,Caleb A. Lareau,Leif S. Ludwig,Donna S. Neuberg,

Mutations targeted using single cell DNA sequencing in AML1012.

2026

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4Suppl. Table 3 from Tracking Rare Single Donor and Recipient Immune and Leukemia Cells after Allogeneic Hematopoietic Cell Transplantation Using Mitochondrial DNA Mutations

Livius Penter,Nicoletta Cieri,Katie Maurer,Marwan Kwok,Haoxiang Lyu,Wesley S. Lu,Giacomo Oliveira,Satyen H. Gohil,Ignaty Leshchiner,Caleb A. Lareau,Leif S. Ludwig,Donna S. Neuberg,

Blood and bone marrow counts of immunosuppression tapering (IST) cohort from routine clinical measurements.

2026

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5Suppl. Fig. 15 from Tracking Rare Single Donor and Recipient Immune and Leukemia Cells after Allogeneic Hematopoietic Cell Transplantation Using Mitochondrial DNA Mutations

Livius Penter,Nicoletta Cieri,Katie Maurer,Marwan Kwok,Haoxiang Lyu,Wesley S. Lu,Giacomo Oliveira,Satyen H. Gohil,Ignaty Leshchiner,Caleb A. Lareau,Leif S. Ludwig,Donna S. Neuberg,

Differential phenotypes of physiologic (donor-) and malignant hematopoietic (recipient-derived) cells.

2026

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6Suppl. Table 2 from Tracking Rare Single Donor and Recipient Immune and Leukemia Cells after Allogeneic Hematopoietic Cell Transplantation Using Mitochondrial DNA Mutations

Livius Penter,Nicoletta Cieri,Katie Maurer,Marwan Kwok,Haoxiang Lyu,Wesley S. Lu,Giacomo Oliveira,Satyen H. Gohil,Ignaty Leshchiner,Caleb A. Lareau,Leif S. Ludwig,Donna S. Neuberg,

Mitochondrial and somatic nuclear DNA mutations identified in CLL using single cell DNA sequencing.

2026

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7Suppl. Fig. 2 from Tracking Rare Single Donor and Recipient Immune and Leukemia Cells after Allogeneic Hematopoietic Cell Transplantation Using Mitochondrial DNA Mutations

Livius Penter,Nicoletta Cieri,Katie Maurer,Marwan Kwok,Haoxiang Lyu,Wesley S. Lu,Giacomo Oliveira,Satyen H. Gohil,Ignaty Leshchiner,Caleb A. Lareau,Leif S. Ludwig,Donna S. Neuberg,

Longitudinal changes of somatic nuclear and mitochondrial DNA mutations in naturally progressing CLL.

2026

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8Suppl. Table 5 from Tracking Rare Single Donor and Recipient Immune and Leukemia Cells after Allogeneic Hematopoietic Cell Transplantation Using Mitochondrial DNA Mutations

Livius Penter,Nicoletta Cieri,Katie Maurer,Marwan Kwok,Haoxiang Lyu,Wesley S. Lu,Giacomo Oliveira,Satyen H. Gohil,Ignaty Leshchiner,Caleb A. Lareau,Leif S. Ludwig,Donna S. Neuberg,

Immunosuppression tapering cohort.

2026

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9Suppl. Fig. 8 from Tracking Rare Single Donor and Recipient Immune and Leukemia Cells after Allogeneic Hematopoietic Cell Transplantation Using Mitochondrial DNA Mutations

Livius Penter,Nicoletta Cieri,Katie Maurer,Marwan Kwok,Haoxiang Lyu,Wesley S. Lu,Giacomo Oliveira,Satyen H. Gohil,Ignaty Leshchiner,Caleb A. Lareau,Leif S. Ludwig,Donna S. Neuberg,

Co-segregation of mitochondrial and somatic nuclear DNA mutations in CLL.

2026

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10Suppl. Fig. 7 from Tracking Rare Single Donor and Recipient Immune and Leukemia Cells after Allogeneic Hematopoietic Cell Transplantation Using Mitochondrial DNA Mutations

Livius Penter,Nicoletta Cieri,Katie Maurer,Marwan Kwok,Haoxiang Lyu,Wesley S. Lu,Giacomo Oliveira,Satyen H. Gohil,Ignaty Leshchiner,Caleb A. Lareau,Leif S. Ludwig,Donna S. Neuberg,

Tracking co-evolution of somatic nuclear and mitochondrial DNA mutations in CLL and AML using single cell DNA and protein sequencing (Tapestri).

2026

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11Suppl. Fig. 4 from Tracking Rare Single Donor and Recipient Immune and Leukemia Cells after Allogeneic Hematopoietic Cell Transplantation Using Mitochondrial DNA Mutations

Livius Penter,Nicoletta Cieri,Katie Maurer,Marwan Kwok,Haoxiang Lyu,Wesley S. Lu,Giacomo Oliveira,Satyen H. Gohil,Ignaty Leshchiner,Caleb A. Lareau,Leif S. Ludwig,Donna S. Neuberg,

Longitudinal changes of somatic nuclear and mitochondrial DNA mutations in evolving CLL.

2026

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12Suppl. Fig. 10 from Tracking Rare Single Donor and Recipient Immune and Leukemia Cells after Allogeneic Hematopoietic Cell Transplantation Using Mitochondrial DNA Mutations

Livius Penter,Nicoletta Cieri,Katie Maurer,Marwan Kwok,Haoxiang Lyu,Wesley S. Lu,Giacomo Oliveira,Satyen H. Gohil,Ignaty Leshchiner,Caleb A. Lareau,Leif S. Ludwig,Donna S. Neuberg,

Applicability of expressed mitochondrial DNA (mtDNA) mutations to distinguish unrelated individuals.

2026

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13Suppl. Fig. 5 from Tracking Rare Single Donor and Recipient Immune and Leukemia Cells after Allogeneic Hematopoietic Cell Transplantation Using Mitochondrial DNA Mutations

Livius Penter,Nicoletta Cieri,Katie Maurer,Marwan Kwok,Haoxiang Lyu,Wesley S. Lu,Giacomo Oliveira,Satyen H. Gohil,Ignaty Leshchiner,Caleb A. Lareau,Leif S. Ludwig,Donna S. Neuberg,

Longitudinal changes of somatic nuclear and mitochondrial DNA mutations in evolving CLL.

2026

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14Suppl. Table 9 from Tracking Rare Single Donor and Recipient Immune and Leukemia Cells after Allogeneic Hematopoietic Cell Transplantation Using Mitochondrial DNA Mutations

Livius Penter,Nicoletta Cieri,Katie Maurer,Marwan Kwok,Haoxiang Lyu,Wesley S. Lu,Giacomo Oliveira,Satyen H. Gohil,Ignaty Leshchiner,Caleb A. Lareau,Leif S. Ludwig,Donna S. Neuberg,

Mutations targeted using single cell DNA sequencing in AML1026.

2026

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15Suppl. Table 7 from Tracking Rare Single Donor and Recipient Immune and Leukemia Cells after Allogeneic Hematopoietic Cell Transplantation Using Mitochondrial DNA Mutations

Livius Penter,Nicoletta Cieri,Katie Maurer,Marwan Kwok,Haoxiang Lyu,Wesley S. Lu,Giacomo Oliveira,Satyen H. Gohil,Ignaty Leshchiner,Caleb A. Lareau,Leif S. Ludwig,Donna S. Neuberg,

Mutations targeted using single cell DNA sequencing in AML1010.

2026

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16Suppl. Table 10 from Tracking Rare Single Donor and Recipient Immune and Leukemia Cells after Allogeneic Hematopoietic Cell Transplantation Using Mitochondrial DNA Mutations

Livius Penter,Nicoletta Cieri,Katie Maurer,Marwan Kwok,Haoxiang Lyu,Wesley S. Lu,Giacomo Oliveira,Satyen H. Gohil,Ignaty Leshchiner,Caleb A. Lareau,Leif S. Ludwig,Donna S. Neuberg,

Samples analyzed for this work using single cell sequencing platforms.

2026

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17Suppl. Fig. 18 from Tracking Rare Single Donor and Recipient Immune and Leukemia Cells after Allogeneic Hematopoietic Cell Transplantation Using Mitochondrial DNA Mutations

Livius Penter,Nicoletta Cieri,Katie Maurer,Marwan Kwok,Haoxiang Lyu,Wesley S. Lu,Giacomo Oliveira,Satyen H. Gohil,Ignaty Leshchiner,Caleb A. Lareau,Leif S. Ludwig,Donna S. Neuberg,

Mutational signatures of mitochondrial DNA (mtDNA) identified using ASAP-seq.

2026

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18Suppl. Table 1 from Tracking Rare Single Donor and Recipient Immune and Leukemia Cells after Allogeneic Hematopoietic Cell Transplantation Using Mitochondrial DNA Mutations

Livius Penter,Nicoletta Cieri,Katie Maurer,Marwan Kwok,Haoxiang Lyu,Wesley S. Lu,Giacomo Oliveira,Satyen H. Gohil,Ignaty Leshchiner,Caleb A. Lareau,Leif S. Ludwig,Donna S. Neuberg,

Clinical data of CLL cohort reanalyzed from Gruber and colleagues.

2026

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19Suppl. Fig. 9 from Tracking Rare Single Donor and Recipient Immune and Leukemia Cells after Allogeneic Hematopoietic Cell Transplantation Using Mitochondrial DNA Mutations

Livius Penter,Nicoletta Cieri,Katie Maurer,Marwan Kwok,Haoxiang Lyu,Wesley S. Lu,Giacomo Oliveira,Satyen H. Gohil,Ignaty Leshchiner,Caleb A. Lareau,Leif S. Ludwig,Donna S. Neuberg,

Co-segregation of mitochondrial and somatic nuclear DNA mutations in AML bone marrow.

2026

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20Suppl. Fig. 12 from Tracking Rare Single Donor and Recipient Immune and Leukemia Cells after Allogeneic Hematopoietic Cell Transplantation Using Mitochondrial DNA Mutations

Livius Penter,Nicoletta Cieri,Katie Maurer,Marwan Kwok,Haoxiang Lyu,Wesley S. Lu,Giacomo Oliveira,Satyen H. Gohil,Ignaty Leshchiner,Caleb A. Lareau,Leif S. Ludwig,Donna S. Neuberg,

Deconvolution of chimeric populations using mitochondrial DNA mutations and germline single nucleotide polymorphisms.

2026

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作者统计

合作学者

合作机构

D-Core

合作者
学生
导师

Shuqiang Li合作论文数34

Catherine J. Wu合作论文数Department of Medical Oncology, Dana-Farber Cancer Institute;Division of Stem Cell Transplantation and Cellular Therapies, Dana-Farber Cancer Institute;Harvard Medical School31

Donna Neuberg合作论文数Department of Biostatistics, Harvard T.H. Chan School of Public Health;Dana-Farber Cancer Institute29

Gad A. Getz合作论文数Harvard Medical School;Department of Pathology, Massachusetts General Hospital;Broad Institute of Harvard and MIT24

Ignaty Leshchiner合作论文数Broad Institute of MIT and Harvard;Department of Medicine, Boston University23

Livius Penter合作论文数Labor für Pädiatrische Molekularbiologie, Charité - Universitätsmedizin Berlin23

Oliveira Giacomo合作论文数IRCCS, San Raffaele Scientific Institute22

Haoxiang Lyu合作论文数21

Satyen Gohil合作论文数21

Caleb Lareau合作论文数School of Humanities and Sciences, Stanford University;School of Medicine, Stanford University;Sloan Kettering Institute, Memorial Sloan Kettering Cancer Center21

Cieri Nicoletta合作论文数21

Ludwig Leif S合作论文数Charité-Universitätsmedizin Berlin, MIT and Harvard21

Jerome Ritz合作论文数Connell and O'Reilly Families Cell Manipulation Core Facility, Dana-Farber Cancer Institute;Harvard Medical School21

Lars Bullinger合作论文数20

Wesley Lu合作论文数20

Garcia Jacqueline S合作论文数Department of Medicine, The University of Chicago20

Maurer Katie合作论文数Kimmel Center for Biology and Medicine at the Skirball Institute, New York University School of Medicine;Sackler Institute of Graduate Biomedical Sciences, New York University School of Medicine;New York University School of Medicine, New York University School of Medicine20

Robert J. Soiffer合作论文数Department of Medical Oncology, Dana-Farber Cancer Institute;Division of Hematologic Malignancies, Dana-Farber Cancer Institute;Harvard Medical School20

Marwan Kwok合作论文数Institute of Cancer and Genomic Sciences, College of Medical and Dental Sciences, University of Birmingham20

Haesook T. Kim合作论文数Department of Data Science, Dana-Farber Cancer Institute;Harvard School of Public Health;Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute20

Mark R. Andersen合作论文数7

Kai Qin Lao合作论文数7

Caifu Chen合作论文数6

Jennifer R. Brown合作论文数CLL Center, Division of Hematologic Malignancies, Dana-Farber Cancer Institute;Harvard Medical School6

Adam Broomer合作论文数5

Aviv Regev合作论文数Howard Hughes Medical Institute;Statistics + Data Science Center, Schwarzman College of Computing, Massachusetts Institute of Technology;Broad Institute, Massachusetts Institute of Technology;The Center for Microbiome Informatics & Therapeutics, Massachusetts Institute of Technology5

Derin Keskin合作论文数Translational Immunogenomics Lab, Center for Immuno-Oncology, Dana Farber Cancer Institute, Medical School, Harvard University;Department of Medicine, Medical School, Harvard University5

Susan J. A. Flood合作论文数5

Neil A. Straus合作论文数5

Michael Hunkapiller合作论文数Pacific Biosciences of California,Inc.4

Antoni Rafalski合作论文数DuPont4

Wandi Zhang合作论文数4

Timothy M. Woudenberg合作论文数4

Federico M. Goodsaid合作论文数4

A. R. KUBELIK合作论文数3

khairuzzaman bashar mullah合作论文数3

mark f oldham合作论文数3

Junko F Stevens合作论文数3

Jean Fan合作论文数Department of Biomedical Engineering, Whiting School of Engineering, Johns Hopkins University3

Mario Suva合作论文数Harvard Stem Cell Institute, Harvard University;Massachusetts General Hospital3

Iorgulescu J Bryan合作论文数Brigham & Womens Hosp3

Wang Jun合作论文数3

Ruff David合作论文数3

Jing Sun合作论文数Department of Medicine, University of Pennsylvania3

Matthew S. Davids合作论文数Division of Lymphoma, Dana-Farber Cancer Institute;Harvard Medical School;Brigham and Women's Hospital3

Robert C. Jones合作论文数3

Scott V. Tingey合作论文数Agricultural Products Department, E. I. du Pont de Nemours and Co. (Inc.),3

Nir Hacohen合作论文数Center for Cancer Immunology, Massachusetts General Hospital;Mass General Research Institute;Broad Institute3

Laura Rassenti合作论文数Cancer Center, University of California, San Diego3

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