Chunhua Weng

Department of Biomedical Informatics, Columbia University, New York, NY 10032, United States

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Papers170 papers

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The COVID-19 Trial Finder

Yingcheng Sun, Alex Butler, Fengyang Lin, Hao Liu, Latoya A Stewart,Jae Hyun Kim, Betina Ross S Idnay, Qingyin Ge, Xinyi Wei,Cong Liu, Chi Yuan,Chunhua Weng

J. Am. Medical Informatics Assoc., no. 3 (2021): 616-621

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Contemporary use of real-world data for clinical trial conduct in the United States: a scoping review

James R Rogers, Junghwan Lee, Ziheng Zhou,Ying Kuen Cheung,George Hripcsak,Chunhua Weng

J. Am. Medical Informatics Assoc., no. 1 (2021): 144-154

WOSEIBibtex

UMLS-based data augmentation for natural language processing of clinical research literature

Tian Kang,Adler Perotte, Youlan Tang, Casey Ta,Chunhua Weng

J. Am. Medical Informatics Assoc., no. 4 (2021): 812-823

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Towards clinical data-driven eligibility criteria optimization for interventional COVID-19 clinical trials

Jae Hyun Kim, Casey N Ta,Cong Liu, Cynthia Sung, Alex M Butler, Latoya A Stewart, Lyudmila Ena, James R Rogers, Junghwan Lee, Anna Ostropolets,Patrick B Ryan, Hao Liu

J. Am. Medical Informatics Assoc., no. 1 (2021): 14-22

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Translating evidence into practice: eligibility criteria fail to eliminate clinically significant differences between real-world and study populations

Amelia J Averitt,Chunhua Weng, Patrick Ryan, Adler Perotte

NPJ DIGITAL MEDICINE, no. 1.0 (2020): 67-10

WOSBibtex

Natural language processing (NLP) tools in extracting biomedical concepts from research articles: a case study on autism spectrum disorder

Jacqueline Peng, Mengge Zhao, James Havrilla,Cong Liu,Chunhua Weng,Whitney Guthrie,Robert Schultz,Kai Wang,Yunyun Zhou

BMC Medical Informatics Decis. Mak., no. 11 (2020): 322

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Severity Prediction for COVID 19 Patients via Recurrent Neural Networks

Junghwan Lee, Casey Ta,Jae Hyun Kim, Cong Liu,Chunhua Weng

medRxiv, (2020)

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Chia, a large annotated corpus of clinical trial eligibility criteria

Fabrício Kury, Alex Butler, Chi Yuan, Li-Heng Fu, Yingcheng Sun, Hao Liu, Ida Sim,Simona Carini,Chunhua Weng

SCIENTIFIC DATA, no. 1.0 (2020): 281-281

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A graph-based method for reconstructing entities from coordination ellipsis in medical text

Chi Yuan, Yongli Wang, Ning Shang, Ziran Li, Ruxin Zhao,Chunhua Weng

J. Am. Medical Informatics Assoc., no. 9 (2020): 1364-1373

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How Have Experimental Cancer Interventions Evolved over Time

Ziran Li, Huanyao Chen, Chi Yuan,Chunhua Weng

MIE, (2020): 252-256

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Deep Phenotyping: Embracing Complexity and Temporality-Towards Scalability, Portability, and Interoperability

Chunhua Weng,Nigam H Shah,George Hripcsak

Journal of Biomedical Informatics, (2020): 103433

EIBibtex

Modelling kidney disease using ontology: insights from the Kidney Precision Medicine Project

Edison Ong, Lucy L Wang,Jennifer Schaub, John F O'Toole, Becky Steck,Avi Z Rosenberg, Frederick Dowd,Jens Hansen,Laura Barisoni,Sanjay Jain,Ian H de Boer,M Todd Valerius

NATURE REVIEWS NEPHROLOGY, no. 11.0 (2020): 686-696

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Understanding the nature and scope of clinical research commentaries in PubMed

James R Rogers,Hollis Mills,Lisa V Grossman, Andrew Goldstein,Chunhua Weng

JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION, no. 3 (2020): 449-456

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Guideline concordant care for prevention of acute chemotherapy-induced nausea and vomiting in children, adolescents, and young adults

Melissa Beauchemin,Lillian Sung,Dawn L Hershman,Chunhua Weng,L Lee Dupuis,Rebecca Schnall

Supportive Care in Cancer, no. 10 (2020): 4761-4769

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A new approach to integrating patient-generated data with expert knowledge for personalized goal setting: A pilot study

Marissa Burgermaster, Jung H Son, Patricia G Davidson,Arlene M Smaldone, Gilad Kuperman, Daniel J Feller, Katherine Gardner Burt, Matthew E Levine,David J Albers,Chunhua Weng,Lena Mamykina

International Journal of Medical Informatics, (2020): 104158

WOSEIBibtex

Combining Clinical Data and Domain Knowledge for Analyzing Mental Disorder Concept Relatedness and Usage