Takigawa Ichigaku

Bioinformatics Center, Institute for Chemical Research, Kyoto University, Kyoto, Japan.

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Papers14 papers

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Graph Minors from Simulated Annealing for Annealing Machines with Sparse Connectivity

Yuya Sugie,Yuki Yoshida, Normann Mertig, Takashi Takemoto, Hiroshi Teramoto,Atsuyoshi Nakamura,Ichigaku Takigawa,Shin-ichi Minato,Masanao Yamaoka,Tamiki Komatsuzaki

TPNC, pp.111-123, (2018)

Cited by1EIBibtex

Exploring phenotype patterns of breast cancer within somatic mutations: a modicum in the intrinsic code

Sohiya Yotsukura,Masayuki Karasuyama,Ichigaku Takigawa,Hiroshi Mamitsuka

BRIEFINGS IN BIOINFORMATICS, no. 4 (2017): 619-633

WOSEIBibtex

Predictions of Cleavability of Calpain Proteolysis by Quantitative Structure-Activity Relationship Analysis Using Newly Determined Cleavage Sites and Catalytic Efficiencies of an Oligopeptide Array

Fumiko Shinkai-Ouchi,Suguru Koyama,Yasuko Ono,Shoji Hata,Koichi Ojima,Mayumi Shindo,David duVerle,Mika Ueno,Fujiko Kitamura,Naoko Doi,Ichigaku Takigawa,Hiroshi Mamitsuka

MOLECULAR & CELLULAR PROTEOMICS, no. 4 (2016): 1262-1280

Cited by3WOSBibtex

The cell competition-based high-throughput screening identifies small compounds that promote the elimination of RasV12-transformed cells from epithelia

Hajime Yamauchi,Takanori Matsumaru,Tomoko Morita,Susumu Ishikawa,Katsumi Maenaka,Ichigaku Takigawa,Kentaro Semba,Shunsuke Kon,Yasuyuki Fujita

Scientific reports, (2015): 15336-15336

Cited by8WOSBibtex

MED26 regulates the transcription of snRNA genes through the recruitment of little elongation complex

Hidehisa Takahashi,Masashi Watanabe,Delnur Anwar,Mio Shibata,Tadasuke Tsukiyama,Wataru Mizushima,Shigetsugu Hatakeyama,Ichigaku Takigawa,Chieri Tomomori-Sato,Shigeo Sato,Amol Ranjan,Chris W. Seidel

NATURE COMMUNICATIONS, (2015): 5941-5941

Cited by23WOSNATUREBibtex

Ribosomes in a stacked array: elucidation of the step in translation elongation at which they are stalled during S-adenosyl-L-methionine-induced translation arrest of CGS1 mRNA

Yui Yamashita,Yoshitomo Kadokura,Naoyuki Sotta,Toru Fujiwara,Ichigaku Takigawa,Akiko Satake,Hitoshi Onouchi,Satoshi Naito

The Journal of biological chemistry, no. 18 (2014): 12693-12704

Cited by11WOSBibtex

Identifying pathways of coordinated gene expression

Timothy Hancock,Ichigaku Takigawa,Hiroshi Mamitsuka

Methods in molecular biology (Clifton, N.J.), (2013): 69-85

Cited by2WOSBibtex

An in silico model for interpreting polypharmacology in drug-target networks

Ichigaku Takigawa,Koji Tsuda,Hiroshi Mamitsuka

Methods in molecular biology (Clifton, N.J.), (2013): 67-80

WOSBibtex

SiBIC: a web server for generating gene set networks based on biclusters obtained by maximal frequent itemset mining

Kei-ichiro Takahashi,Ichigaku Takigawa,Hiroshi Mamitsuka

PloS one, no. 12 (2013): e82890-e82890

Cited by1WOSBibtex

Identifying neighborhoods of coordinated gene expression and metabolite profiles

Timothy Hancock,Nicolas Wicker,Ichigaku Takigawa,Hiroshi Mamitsuka

PloS one, no. 2 (2012): e31345-e31345

Cited by10WOSBibtex

ROS-DET: robust detector of switching mechanisms in gene expression

Mitsunori Kayano,Ichigaku Takigawa,Motoki Shiga,Koji Tsuda,Hiroshi Mamitsuka

NUCLEIC ACIDS RESEARCH, no. 11 (2011): e74-e74

Cited by12WOSBibtex

Mining significant substructure pairs for interpreting polypharmacology in drug-target network

Ichigaku Takigawa,Koji Tsuda,Hiroshi Mamitsuka

PloS one, no. 2 (2011): e16999-e16999

Cited by35WOSBibtex

On the performance of methods for finding a switching mechanism in gene expression

Mitsunori Kayano,Ichigaku Takigawa,Motoki Shiga,Koji Tsuda,Hiroshi Mamitsuka

Genome informatics. International Conference on Genome Informatics, (2010): 69-83

Cited by1WOSBibtex

CaMPDB: a resource for calpain and modulatory proteolysis

David duVerle,Ichigaku Takigawa,Yasuko Ono,Hiroyuki Sorimachi,Hiroshi Mamitsuka

Genome informatics. International Conference on Genome Informatics, (2010): 202-213

Cited by43WOSBibtex

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Takigawa IchigakuBinding

Papers14 papers

Takigawa Ichigaku