Xuanping Zhang

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Accurately estimating the length distributions of genomic micro-satellites by tumor purity deconvolution

Yixuan Wang,Xuanping Zhang, Xiao Xiao, Fei-Ran Zhang, Xinxing Yan,Xuan Feng,Zhongmeng Zhao,Yanfang Guan,Jiayin Wang

BMC Bioinformatics, no. suppl (2020): 1-14

Cited by1WOSBibtex

A hybrid correcting method considering heterozygous variations by a comprehensive probabilistic model

Jiaqi Liu,Jiayin Wang, Xiao Xiao, Xin Lai, Daocheng Dai,Xuanping Zhang,Xiaoyan Zhu,Zhongmeng Zhao, Juan Wang, Zhimin Li

BMC genomics, no. Suppl 10 (2020): 753

WOSBibtex

A machine learning framework for genotyping the structural variations with copy number variant

Tian Zheng, Xiaoyan Zhu,Xuanping Zhang,Zhongmeng Zhao,Xin Yi,Jiayin Wang, Hongle Li

BMC MEDICAL GENOMICS, no. SUPnan (2020): 79

WOSBibtex

A graph-based algorithm for estimating clonal haplotypes of tumor sample from sequencing data

Yixuan Wang,Xuanping Zhang, Shuai Ding,Yu Geng, Jianye Liu,Zhongmeng Zhao, Rong Zhang,Xiao Xiao,Jiayin Wang

BMC Medical Genomics, no. suppl (2019): 107-118

Cited by1WOSBibtex

FCRF: An efficient algorithm for detecting circular fusion transcript from RNA-Seq data

Han Yu,Xuanping Zhang,Yanfang Guan,Yongsheng Chen,Xiao Xiao,Jiayin Wang

CANCER RESEARCH, no. SUP13 (2019)

Bibtex

CMSI: A Bayesian model for estimating clonal micro-satellites instability from NGS data

Yixuan Wang,Xuanping Zhang,Yi Huang,Tao Liu,Xiao Xiao,Jiayin Wang

CANCER RESEARCH, no. SUP13 (2019)

Bibtex

An Artificial Fish Swarm Algorithm for Identifying Associations between Multiple Variants and Multiple Phenotypes

Ruoyu Liu, Xin Lai, Xiao Xiao,Xuanping Zhang,Xiaoyan Zhu,Jiayin Wang

BIBM, pp.2682-2689, (2019)

EIBibtex

Estimating the Length Distributions of Genomic Micro-satellites from Next Generation Sequencing Data

Xuan Feng, Huan Hu,Zhongmeng Zhao,Xuanping Zhang,Jiayin Wang

IWBBIO, pp.461-472, (2018)

EIBibtex

Efficient image encryption scheme with synchronous substitution and diffusion based on double S-boxes

Xuanping Zhang, Rui Guo, Hengwei Chen,Zhongmeng Zhao,Jiayin Wang

Chinese Physics B, no. 8 (2018): 080701

Bibtex

SubHap: An efficient algorithm for reconstructing clonal haplotypes of tumor sample from NGS data

Rong Zhang,Yu Geng,Jianye Liu,Zhongmeng Zhao,Xuanping Zhang,Jiayin Wang

CANCER RESEARCH, no. SUP13 (2018)

Bibtex

CIGenotyper: A Machine Learning Approach for Genotyping Complex Indel Calls

Tian Zheng,Yang Li,Yu Geng,Zhongmeng Zhao,Xuanping Zhang,Xiao Xiao,Jiayin Wang

IWBBIO, pp.473-485, (2018)

Cited by1EIBibtex

TNSim: A Tumor Sequencing Data Simulator for Incorporating Clonality Information

Yu Geng,Zhongmeng Zhao, Mingzhe Xu,Xuanping Zhang,Xiao Xiao,Jiayin Wang

ICIC, pp.371-382, (2018)

EIBibtex

Correcting genomic deletion calls with complex boundaries from next generation sequencing data

Zhongmeng Zhao, Zewen Tian,Yu Geng,Siyu He,Xuanping Zhang,Jiayin Wang

pp.1810-1817 (2018)

EIBibtex

A computational method for detecting the associations between multiple loci and phenotypes

Zhongmeng Zhao, Jiali Huang, Mingzhe Xu, Ruoyu Liu,Siyu He,Xuanping Zhang,Jiayin Wang

pp.2182-2189 (2018)

EIBibtex

Abstract 5301: SubHap: An efficient algorithm for reconstructing clonal haplotypes of tumor sample from NGS data

Rong Zhang,Yu Geng, Jianye Liu,Zhongmeng Zhao,Xuanping Zhang,Jiayin Wang

Cancer Research, (2018): 5301-5301

Bibtex

Synstable Fusion: A Network-Based Algorithm for Estimating Driver Genes in Fusion Structures

Mingzhe Xu,Zhongmeng Zhao,Xuanping Zhang, Aiqing Gao, Shuyan Wu,Jiayin Wang

Molecules (Basel, Switzerland), no. 8 (2018)

Cited by1WOSBibtex

An Efficient Algorithm for Sensitively Detecting Circular RNA from RNA-seq Data

Xuanping Zhang, Yidan Wang,Zhongmeng Zhao,Jiayin Wang

International journal of molecular sciences, no. 10 (2018)

WOSBibtex

Abstract 5294: CIMerge: A machine learning approach for merging and genotyping complex indel calls from NGS data

Tian Zheng, Yang Li,Yu Geng,Zhongmeng Zhao,Xuanping Zhang,Jiayin Wang

Cancer Research, (2018): 5294-5294

Bibtex

CIMerge: A machine learning approach for merging and genotyping complex indel calls from NGS data

Tian Zheng,Yang Li,Yu Geng,Zhongmeng Zhao,Xuanping Zhang,Jiayin Wang

CANCER RESEARCH, no. SUP13 (2018)

Bibtex

An improved burden-test pipeline for identifying associations from rare germline and somatic variants

Yu Geng,Zhongmeng Zhao,Xuanping Zhang, Wenke Wang, Xingjian Cui, Kai Ye,Xiao Xiao,Jiayin Wang

BMC genomics, no. Suppl 7 (2017): 753

Cited by4WOSBibtex

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Papers30 papers

Xuanping Zhang