Bounded search for de novo identification of degenerate cis-regulatory elements

BMC Bioinformatics, no. 1 (2006): 254-17

Cited by: 79|Views14
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Abstract

BACKGROUND: The identification of statistically overrepresented sequences in the upstream regions of coregulated genes should theoretically permit the identification of potential cis-regulatory elements. However, in practice many cis-regulatory elements are highly degenerate, precluding the use of an exhaustive word-counting strategy for ...More

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