BioNLP Shared Task 2011 - Bacteria Gene Interactions and Renaming.

Julien Jourde, Alain-Pierre Manine,Philippe Veber,Karën Fort,Robert Bossy, Érick Alphonse,Philippe Bessières

BioNLP Shared Task '11: Proceedings of the BioNLP Shared Task 2011 Workshop（2011）

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摘要

We present two related tasks of the BioNLP Shared Tasks 2011: Bacteria Gene Renaming (Rename) and Bacteria Gene Interactions (GI). We detail the objectives, the corpus specification, the evaluation metrics, and we summarize the participants' results. Both issued from PubMed scientific literature abstracts, the Rename task aims at extracting gene name synonyms, and the GI task aims at extracting genic interaction events, mainly about gene transcriptional regulations in bacteria.

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关键词

Bacteria Gene Interactions,Bacteria Gene Renaming,GI task,Rename task,gene name synonym,gene transcriptional regulation,related task,BioNLP Shared Tasks,PubMed scientific literature abstract,corpus specification,bacteria gene interaction

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