Filling a Protein Scaffold with a Reference

IEEE Transactions on NanoBioscience, pp. 123-130, 2016.

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Abstract:

In mass spectrometry-based de novo protein sequencing, it is hard to complete the sequence of the whole protein. Motivated by this, we study the (one-sided) problem of filling a protein scaffoldS with some missing amino acids, given a sequence of contigs none of which is allowed to be altered, with respect to a complete reference protein ...More

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