Faster Exact Computation of rSPR Distance via Better Approximation.

IEEE/ACM Transactions on Computational Biology and Bioinformatics(2020)

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摘要
Due to hybridization events in evolution, studying two different genes of a set of species may yield two related but different phylogenetic trees for the set of species. In this case, we want to measure the dissimilarity of the two trees. The rooted subtree prune and regraft (rSPR) distance of the two trees has been used for this purpose. The problem of computing the rSPR distance of two given tre...
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关键词
Phylogeny,Approximation algorithms,Forestry,Vegetation,Upper bound,Java,Software
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