Skmer: assembly-free and alignment-free sample identification using genome skims

Genome biology, Volume 20, Issue 1, 2019, Pages 34

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Abstract:

The ability to inexpensively describe taxonomic diversity is critical in this era of rapid climate and biodiversity changes. The recent genome-skimming approach extends current barcoding practices beyond short markers by applying low-pass sequencing and recovering whole organelle genomes computationally. This approach discards the nuclear...More

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