ESPResSo++ 2.0: Advanced methods for multiscale molecular simulation

Computer Physics Communications(2019)

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摘要
Molecular simulation is a scientific tool used in many fields including material science and biology. This requires constant development and enhancement of algorithms within molecular simulation software packages. Here, we present computational tools for multiscale modeling developed and implemented within the ESPResSo++ package. These include the latest applications of the adaptive resolution scheme, the hydrodynamic interactions through a lattice Boltzmann solvent coupled to particle-based molecular dynamics, the implementation of the hierarchical strategy for equilibrating long-chained polymer melts and a heterogeneous spatial domain decomposition.
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关键词
Molecular dynamics,Multiscale modeling,Coarse graining,Soft matter,Lattice Boltzmann,Molecular simulations,High performance computer,Computational physics
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