OSPREY 3.0: Open-source protein redesign for you, with powerful new features: osprey 3.0: Open-Source Protein Redesign for You, with Powerful New Features

Adegoke Ojewole
Adegoke Ojewole
Anna U. Lowegard
Anna U. Lowegard
Marcel S. Frenkel
Marcel S. Frenkel
Pablo Gainza
Pablo Gainza
Hunter M. Nisonoff
Hunter M. Nisonoff
Aditya Mukund
Aditya Mukund
Siyu Wang
Siyu Wang
Graham T. Holt
Graham T. Holt

JOURNAL OF COMPUTATIONAL CHEMISTRY, pp. 2494.0-2507.0, 2018.

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Abstract:

We present osprey 3.0, a new and greatly improved release of the osprey protein design software. Osprey 3.0 features a convenient new Python interface, which greatly improves its ease of use. It is over two orders of magnitude faster than previous versions of osprey when running the same algorithms on the same hardware. Moreover, osprey 3...More

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