DIVERSITY OF HIV-1 IN AQUITAINE , SOUTH-WESTERN FRANCE , 2012-2016 Running title : HIV-1 IN SOUTH WESTERN FRANCE

Th is pa pe r h as b ee n pe er -re vi ew ed a nd a cc ep te d fo r p ub lic at io n, b ut h as y et to u nd er go co py ed iti ng a nd p ro of co rr ec tio n. T he fi na l p ub lis he d ve rs io n m ay d iff er fr om th is pr oo f. DIVERSITY OF HIV-1 IN AQUITAINE, SOUTH-WESTERN FRANCE, 2012-2016 Running title : HIV-1 IN SOUTH WESTERN FRANCE Camille Tumiotto, Pantxika Bellecave, Patricia Recordon-Pinson, Alexi Groppi, Macha Nikolski and Hervé Fleury 1 University Hospital of Bordeaux, Bordeaux 2 CNRS UMR 5234 MFP University of Bordeaux 3 Bordeaux Bioinformatics Center (CBiB), University of Bordeaux, Bordeaux, France Correspondence: H Fleury, MD, PhD, Laboratoire de Virologie, Université de Bordeaux, 146 rue Léo Saignat, 33076 Bordeaux, France (herve.fleury@u-bordeaux.fr)