A Multi-Species Functional Embedding Integrating Sequence and Network Structure

Jason Fan
Jason Fan
Anthony Cannistra
Anthony Cannistra
Inbar Fried
Inbar Fried
Tim Lim
Tim Lim
Thomas Schaffner
Thomas Schaffner

research in computational molecular biology, pp. 263-265, 2018.

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Abstract:

In this work, we take a new approach to transferring knowledge across species by expanding the notion of homology through explicit measures of functional similarity between proteins in different species. Specifically, our kernel-based method, H , integrates sequence and network structure to create a in which proteins from different speci...More

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