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In Silico Designing And Interaction Of Coumarin-Amino Acid(S) Conjugates With Integrin Like Protein Of Cryptococcus Neoformans: Insights On Antifungal Drug Design

BIOINTERFACE RESEARCH IN APPLIED CHEMISTRY(2021)

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摘要
In the present work, a library of 117 coumarin-amino acid(s) conjugates was designed, and molecular docking study was performed to investigate their possible role as fungal integrin like receptor antagonists. The objective of this study is in-silico designing and docking of coumarin-amino acidconjugates against integrin like protein of Cryptococcus neoformans. In the absence of a crystallographic structure of integrin of the fungal pathogen, a homology model of protein OXH63806.1 of Cryptococcus neoformans was developed using the currently available X-ray structure of humanintegrin as a template. The quality of the 3D model obtained by homology modeling was evaluated by the PROCHECK program. A docking study using coumarin-amino acid(s) conjugates as ligands on the binding site of the modeled receptor was carried out to understand the protein-ligand bindinginteractions. Some of the compounds have shown very good binding energies ranging from -10.32 to -10.94 Kcal/mol towards the target receptor. These results may be helpful in the designing and development of new antifungal agents as integrin like protein antagonists.
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关键词
Antifungal, Cryptococcus neoformans, Drug Design, integrin, RGD mimetics, Homology modeling
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