Rapid Diagnosis of <em>Capnocytophaga canimorsus</em> Septic Shock in an Immunocompetent Individual Using Real-Time Nanopore Sequencing

Seweryn Bialasiewicz,Tania P.S. Duarte, Son H. Nguyen,Vichitra Sukumaran,Alexandra Stewart, Sally Appleton,Miranda E. Pitt,Arnold Bainomugisa,Amy V. Jennison,Rikki Graham,Lachlan J.M. Coin,Krispin Hajkowicz

crossref（2018）

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摘要

We present a case of Capnocytophaga canimorsus septic shock after a dog bite in an immunocompetent individual, where real-time nanopore metagenomic sequencing characterized the microbial agent within 19 hours, with subsequent confirmation using droplet digital PCR. Oral swabs from the dog demonstrated a nearly-identical C. canimorsus isolate by sequencing.

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Rapid Diagnosis of &lt;em&gt;Capnocytophaga canimorsus&lt;/em&gt; Septic Shock in an Immunocompetent Individual Using Real-Time Nanopore Sequencing

Rapid Diagnosis of <em>Capnocytophaga canimorsus</em> Septic Shock in an Immunocompetent Individual Using Real-Time Nanopore Sequencing