Characterization of Lacinutrix neustonica sp. nov., Isolated from the Sea Surface Microlayer of Brackish Lake Shihwa, South Korea

Jy Young Choi, Soo Yoon Kim, Yeon Woo Hong,Bok Jin Kim, Dong Young Shin, Jin Kyeong Kang,Byung Cheol Cho,Chung Yeon Hwang

DIVERSITY-BASEL(2023)

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摘要
A Gram-negative, strictly aerobic, non-motile, slightly curved rod-shaped bacterial strain, designated as HL-RS19(T), was isolated from a sea surface microlayer (SML) sample of the brackish Lake Shihwa. Here, we characterized the new strain HL-RS19(T) using a polyphasic approach to determine its taxonomic position. A phylogenetic analysis of its 16S rRNA gene sequence revealed that strain HL-RS19(T) belonged to the genus Lacinutrix and was closely related to L. mariniflava AKS432(T) (97.9%), L. algicola AKS293(T) (97.8%), and other Lacinutrix species (<97.3%). The complete genome sequence of strain HL-RS19(T) comprised a circular chromosome of 3.9 Mbp with a DNA G+C content of 35.2%. Genomic comparisons based on the average nucleotide identity and digital DNA-DNA hybridization showed that strain HL-RS19(T) was consistently discriminated from its closely related taxa in the genus Lacinutrix. Strain HL-RS19(T) showed optimal growth at 20-25 degrees C, pH 6.5-7.0, and 3.0-3.5% (w/v) sea salts. The major fatty acids (>5%) of strain HL-RS19(T) were identified as iso-C-15:1 G (16.5%), iso-C-16:0 3-OH (12.9%), anteiso-C-15:1 A (9.9%), anteiso-C-15:0 (9.7%), iso-C-15:0 (9.0%), and iso-C-15:0 3-OH (8.3%). The polar lipids consisted of phosphatidylethanolamine, three unidentified aminolipids, an unidentified phospholipid, and two unidentified lipids. The major respiratory quinone was MK-6. Based on phylogenetic, genomic, phenotypic, and chemotaxonomic data, strain HL-RS19(T) represents a novel species belonging to the genus Lacinutrix, for which the name Lacinutrix neustonica sp. nov. is proposed. The type strain is HL-RS19(T) (=KCCM 90497(T) = JCM 35710(T)). The genome sequence analysis of strain HL-RS19(T) suggests that it may be well adapted to a harsh SML environment and is likely involved in arsenic cycling, potentially contributing to the bioremediation of anthropogenic arsenic pollution.
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关键词
Lacinutrix neustonica sp. nov., Lake Shihwa, neuston, new species, sea surface microlayer
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