Polymorphism of Bolivian accessions of Arachis hypogaea L. revealed by allergen coding DNA markers

Jana Ziarovska,Lucia Urbanova, Julio Montero-Torres, Adam Kovacik, Lucia Klongova,Rohit Bharati, Sandra Romero-Ortega,Eloy Fernandez-Cusimamani,Olga Leuner

PLANT SOIL AND ENVIRONMENT(2023)

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摘要
Arachis hypogaea L. is an annual legume that is one of the most consumed plant species. On the other hand, it belongs to one of the most monitored clinically important allergens worldwide. The polymorphism of this species based on allergen coding genes could be useful in its characterisation, but previously, no allergen-base d marker techniques have been developed for peanuts. A new type of DNA-base d markers of coding regions were used to analyse the variability of 21 peanut accessions -BBAP (Bet v1 based amplicon polymorphism), PBAP (profilin based amplicon polymorphism), and VBAP (vicilin based amplicon polymorphism). All of the used technique pro -vide d polymorphic fingerprints and distinguished the analysed peanut accessions. The effectivity of these techniques corresponds to the presence of the allergen homologous sequences that are a part of the A. hypogaea genome. VBAP was the most effective in distinguishing the analysed peanut accessions when compared to the results of BBAP and PBAB. For BBAP, two of the analysed accessions provided the same fingerprinting pattern. The ability of the used markers to detect polymorphisms was comparable, with an average polymorphism information content (PIC) value of 0.47.
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关键词
allergen markers,DNA analysis,food safety,genetic resources,peanut accessions
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