基本信息
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个人简介
Computational Mass Spectrometry, Bioinformatics, Proteomics, Metabolomics, Natural Products, Therapeutic molecules, Big Data science, Crowdsourcing
Broadly defined, Bandeira's research interests are in bioinformatics and computational biology, with a special focus on computational mass spectrometry. He is particularly interested in algorithmic and statistical problems in proteomics and on how mass spectrometry instruments can be used to identify and quantify proteins, post-translational modifications, protein structure features and protein-protein interactions.
A significant part of his recent work stems from the novel Spectral Networks paradigm introduced by his research group - in a departure from previous approaches that interpret each spectrum in isolation, spectral networks algorithms derive consensus interpretations for groups of spectra from overlapping peptides. By focusing on the detection, assembly and consensus interpretation of multiple spectra from overlapping peptides it becomes possible to address new challenges such as: how to reconstruct a protein sequence given only MS/MS spectra of some of its subsequences? Find this answer and more right here!
Capsule Bio:
Bandeira earned a Ph.D. in computer science and bioinformatics from the University of California, San Diego. He holds a joint appointment with the Skaggs School of Pharmacy and Pharmaceutical Sciences. He earned a master's in applied artificial intelligence and a bachelor's in computer science from the New University of Lisbon.
研究兴趣
论文共 153 篇作者统计合作学者相似作者
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Paulo Wender P. Gomes,Helena Mannochio-Russo, Robin Schmid,Simone Zuffa, Tito Damiani, Luis-Manuel Quiros-Guerrero, Andrés Mauricio Caraballo-Rodríguez,Haoqi Nina Zhao, Heejung Yang, Shipei Xing, Vincent Charron-Lamoureux, Desnor N. Chigumba,
biorxiv(2024)
Research squareno. 2 (2024): 336-345
JOURNAL OF PROTEOME RESEARCHno. 2 (2024): 532-549
Simone Zuffa,Robin Schmid,Anelize Bauermeister, Paulo Wender P. Gomes, Andres M. Caraballo-Rodriguez,Yasin El Abiead,Allegra T. Aron,Emily C. Gentry,Jasmine Zemlin,Michael J. Meehan,Nicole E. Avalon,Robert H. Cichewicz,
Nature Microbiologyno. 2 (2024): 336-345
Journal of proteome researchno. 2 (2023): 287-301
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