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    BioDesign Research

    BioDesign Research

    JournalISSN 2693-1257eISSN 2693-1257

    年发文量

    研究主题

    论文(159)

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    1SSAP-mediated Recombineering for Genome Editing and Chassis Development in Lactic Acid Bacteria
    Xuejing Zhang,Siyu Zhang,Quanfeng Liang,Qingsheng Qi,Mengmeng Liu
    2026
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    2Bacterial Engineered Living Materials for Biosensing: Design Principles, Biofabrication, Functional Integration, and Emerging Applications
    Fulya Sahin, Md Sharifuzzaman, Lorenz Adrian,Zeynep Altintas
    2026
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    3Modular Xylose-Methanol Co-culture System for Enhanced Catharanthine Production in Pichia Pastoris
    Xiaojing Jiang, Jucan Gao, Cuifang Ye,Chang Dong,Jiazhang Lian
    2026
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    4Precision Meets Scale: DSB- and Recombinase-Free Targeted Insertion of Large DNA Fragments
    Koppolu Raja Rajesh Kumar, Ayushi Singh

    Targeted insertion of large DNA fragments has been constrained by the genotoxicity associated with double-strand breaks (DSBs) and the limitations of two-step recombinase systems. Three independently developed mammalian platforms, Quadruple pegRNA (QuadPE), Prime Assembly (PA), and PRIME-In, now achieve programmable, DSB- and recombinase-free insertion of up to 26 kb, 11.3 kb, and 9.2 kb, respectively, through convergent yet mechanistically distinct flap-guided integration strategies. Notably, QuadPE and PA achieve integration independent of cell-cycle progression. Furthermore, these systems outperform several existing recombinase- and/or transposase-based tools, underscoring their translational potential for therapeutic utility. Their mechanistic logic also provides a forward path for the DSB-free and recombinase-free integration of large DNA sequences in crop biotechnology.

    2026
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    5Sugar 1.0 to 4.0: from Conventional Sugar Production to Precision Biomanufacturing of Healthy Sugars
    Zihao Zhang, Junlin Li, Jiahao Zhang,Qibin Wu, Fei Chen,Youxiong Que

    Excessive intake of free sugars is a major modifiable risk factor for obesity, type 2 diabetes and cardiovascular disease, and it is a global public-health priority to reduce dietary sugar while preserving sensory quality. Referred to here as “healthy sugars”, the low-calorie monosaccharides D-allulose and D-tagatose combine sucrose-like sensory and bulking behavior with a distinct metabolic fate in humans and, for D-tagatose, with defence-inducing activity in plants. This review traces the evolution of sugar supply through four stages, from agricultural extraction of sucrose (Sugar 1.0) and enzymatic hydrolysis to high-fructose syrup (Sugar 2.0) to chemically synthesized high-intensity sweeteners (Sugar 3.0) and precision biomanufacturing of healthy sugars (Sugar 4.0). We review the molecular basis of healthy-sugar action in mammalian metabolic homeostasis and in plant sweet immunity, then compare manufacturing platforms, equilibrium-limited enzymatic epimerization, immobilized-enzyme and continuous-reactor processes, thermodynamically driven cell-free cascades, and cell-free CO2-to-hexose synthesis, through a consolidated cross-platform comparison of conversion, titer, yield, scalability and technology readiness. We then set out an amyloplast-targeted compartmentalised design for sugar-crop chassis, a distinct phosphorylated route for D-tagatose, and a climate-adaptive sugarcane, sugar beet, sorghum manufacturing crops. Finally we examine the conditions under which a plant-chassis route could offer cost or carbon advantages, comparing feedstock, energy, separation and carbon-balance considerations across platforms, and comparing the ingredient and biosafety requirements applying in the United States, the European Union and China. The plant-chassis route is presented throughout as a design proposal requiring crop-level validation, and the prerequisites for its projected advantages are stated explicitly.

    2026
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    立即登录,查看全部 159 篇论文

    高被引作者

    作者引用发文
    Xiaohan Yang28113
    Gerald A. Tuskan2399
    Guoliang Yuan2247
    Mahmud Hassan1916
    Jay Chen1836
    Timothy J. Tschaplinski1506
    Liu Y1505
    Haiwei Lu1454
    Liu Degao1333
    David J. Weston1334

    高产作者

    作者引用发文
    Xiaohan Yang28113
    Gerald A. Tuskan2399
    Jifeng Yuan488
    Guoliang Yuan2247
    Jiazhang Lian217
    Jay Chen1836
    Timothy J. Tschaplinski1506
    Mahmud Hassan1916
    Liu Y1505
    Yang Zhang365

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