Gram-negative bacteria are surrounded by inner and outer membranes whose glycerophospholipid building blocks are synthesized in the inner membrane and redistributed to the outer membrane by poorly understood mechanisms. In eukaryotes, bridge-like lipid transfer proteins (BLTPs) transfer glycerophospholipids between membranes to support membrane homeostasis and biogenesis. Bacterial proteins in the AsmA family are related to BLTPs in structure and are proposed also to function in lipid transfer. Here we adapted a well-established in vitro lipid transfer assay to provide biochemical evidence that AsmA family proteins, TamB and YhdP, have the ability to transfer glycerophospholipids between membranes, supporting similar functions for AsmA proteins and BLTPs.
Membrane contact sites are organized by protein assemblies that physically couple organelles and coordinate lipid metabolism, yet the structural principles that enable lipid exchange across these junctions remain poorly defined. At the nuclear-vacuolar junction (NVJ) in budding yeast, the tethering protein Mdm1 and its binding partner Nvj3 form a complex that regulates lipid metabolic pathways, but the structural features underlying their interaction have not been resolved. Here, we use AlphaFold-based complex prediction and comparative structural analysis to define the organization of Nvj3-Mdm1 complex assembly. We identify a high-confidence heterodimer in which conserved PXA and PXC domains generate an extended tunnel spanning both proteins. Tunnel analysis predicts a core hydrophobic conduit traversing the Nvj3-Mdm1 interface, consistent with a lipid-compatible architecture. Evolutionary conservation is enriched at the Nvj3-Mdm1 interface. The predicted conduit shares geometric and physicochemical properties with bridge-like lipid transfer proteins, including Atg2, Fmp27, and Hob2, suggesting that heteromeric tether assemblies may contribute directly to inter-organelle lipid transfer. Notably, this conduit is predicted to arise from a heteromeric α-helical assembly rather than the β-sheet-rich architecture characteristic of canonical bridge-like lipid transfer proteins. Comparative phylogenetic analyses showed that Nvj3 and Mdm1 share broadly congruent evolutionary patterns across Saccharomycetes, consistent with their conserved functional association. Together, these findings define Nvj3 as a structural partner of Mdm1 and support a conduit-based model of lipid transfer at the NVJ.
Membrane contact sites (MCSs) are dynamic subcellular compartments formed between organelles that coordinate diverse aspects of cellular communication, including signaling, metabolism, and membrane organization. Tools capable of monitoring and controlling the spatially localized and dynamic properties of MCSs are needed to dissect their regulatory mechanisms and physiological roles. Recent advances in protein engineering have begun to address this need. Proximity-based reporters, chemogenetic approaches, and optogenetic systems have been developed to enable the visualization, interrogation, and manipulation of inter-organelle contacts with improved spatial and temporal precision. This minireview highlights key developments in these molecular toolkits and their representative applications in studying MCS biology. These approaches provide new insights into organelle crosstalk and may inform future therapeutic strategies targeting MCSs.
Subcellular targeting and functionality of plant sucrose transporters (SUTs) are affected at the post-translational level by protein-protein interactions. A systematic screening for SUT-interacting proteins identified a novel plasmodesma (PD)-localized membrane protein belonging to the HVA22 family of stress-induced ER proteins. It carries three transmembrane domains and three zinc-finger domains, interacts with all three sucrose transporters from potato, and co-localizes with PD callose and PD marker proteins. Detailed analyses of transgenic potato plants with decreased expression of this PD protein displaying phenotypic alterations regarding trichome length, leaf expansion, root length, flowering time and tuberization helped to determine its physiological function. These effects are partially graft-transmissible indicating the participation of phloem-mobile signals. Changes in the levels of callose in RNAi plants suggested effects on PD permeability. Co-infiltration experiments revealed enhanced mobility of sucrose transporter—GFP fusion proteins via plasmodesmata in the presence of the HVA22-like protein. The analysis of transgenic plants further suggests that HVA22 protein is a general regulator of PD permeability in potato. Taken together, the HVA22-like protein is an ER protein localized close to phloem plasmodesmata and enhances mobility of GFP proteins of different sizes.
Mitochondria and peroxisomes have long been recognized as interconnected. More than half a century ago it was observed that both types of cell organelles exhibit defects in peroxisome biogenesis disorders. Remarkably, until today, the molecular basis of this connection remains elusive. This Short Review aims to highlight some of the functional links between peroxisomes and mitochondria, and how genetic defects in peroxisomes may impact mitochondria.
