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    Journal of Microbiological Methods

    Journal of Microbiological Methods

    JournalISSN 0167-7012eISSN 1872-8359中科院 生物学 4区

    年发文量

    研究主题

    论文(7187)

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    1Epidemiological Modeling and Optimal Intervention Strategies for Seasonal Scrub Typhus Infection in Human Population Mediated by Mites and Rodents.
    T. Kashyap, Rakesh Kumar
    2026
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    2Automated and Spatially Resolved Quantification of Phage-Mediated Lysis Intensity in Spot Assays Using a Resolution-Independent Image-Analysis Platform
    Yuechong Liu,Juhee Ahn
    2026
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    3Cerebrospinal Fluid-Based Onco-mNGS for the Identification of Neoplastic Meningitis: CNV Profiling and Exploratory Microbial Analysis
    Daiquan Gao, Kun Fang,Xuebin Jiang, Ruotong Ren,Yunzhou Zhang
    2026
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    4Advanced Microscopy of Oral Methanogenic Archaea: Insights and Challenges
    Sarepta Louis,Hervé Tassery,Ivan Panayotov,Alban Desoutter,Hamideh Salehi, Jean-Pierre Baudoin, Hamadou Oumarou Hama,Virginie Pilliol,Elodie Terrer,Amel Slimani
    2026
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    5A Validated, High-Throughput and Resource-Efficient Digital Densitometric Method for Antiviral and Cytotoxicity Screening Against Poxviruses
    Carolina Colombelli Pacca-Mazaro, Eliza Flores-Souza, Débora Patrícia Martins de Deus,Jordana Grazziela Alves Coelho-dos-Reis, Tamiris Vanessa Miguel de Souza,Jaqueline Maria Siqueira Ferreira, Mariana Costa Ferreira,Tânia Maria de Almeida Alves, Jacqueline Aparecida Takahashi, Tiago Henrique,Erna Geessien Kroon,Thaís de Fátima Silva Moraes,

    Reference methods in antiviral drug discovery, the plaque reduction assay (PRA) and viral yield reduction, are labor-intensive and low-throughput, whereas tetrazolium-based metabolic assays (MTT) may be unsuitable for viruses that sustain host-cell metabolism during productive infection, including poxviruses. We validated a digital densitometric assay (DDA), which quantifies antiviral and cytotoxic effects in crystal violet-stained monolayers using the open-source software Fiji/ImageJ, against three reference methods, with vaccinia virus strain Western Reserve in Vero cells. Across 38 fungal extracts, DDA agreed substantially with PRA for antiviral activity (Lin's concordance correlation coefficient, CCC = 0.869; 95% limits of agreement −31.5 to +21.1 percentage points) and moderately with MTT for cytotoxicity (CCC = 0.677) and was more precise between replicates (median coefficient of variation 2.5% versus 5.5%). For the test compound FAC22, the half-maximal cytotoxic concentration was 238.3 μM by DDA and 46.4 μM by MTT, a five-fold difference between readouts; the half-maximal effective concentration was 8.83 μM by viral yield reduction and 11.9 μM by DDA over its non-cytotoxic range. In infected cultures MTT separated virus and cell controls by only 1.08 to 1.39-fold, precluding estimation of an effective concentration, against 1.8 to 2.3-fold for DDA. DDA met conventional robustness criteria on the screening plate (Z′ = 0.818 antiviral, 0.861 cytotoxicity), comparable to PRA (Z′ = 0.91), cut reagent consumption by 80 to 90%, and shortened analysis from 20 min to under 1 min per plate. DDA is accurate, resource-efficient and scalable for poxvirus screening, and applicable to other cytopathic viruses pending validation

    2026
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    AG ODONNELL58314
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    Ia Basheer49651
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