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    Virus Research

    Virus Research

    JournalISSN 0168-1702eISSN 1872-7492中科院 医学 4区

    年发文量

    研究主题

    论文(8261)

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    1Zoonotic Viral Spillover: from Reservoir Ecology and Viral Evolution to Pandemic Prevention
    Maryam Mashhadi Abolghasem Shirazi, Ochilova Dilorom, Shamuratova Gulnora Baxtiyorovna, Aseel Smerat

    Zoonotic viral spillover represents a major global health challenge arising from complex interactions among viral evolution, reservoir ecology, host biology, environmental disruption, and human activities. Successful emergence requires viruses to overcome successive ecological, cellular, and immunological barriers, including receptor compatibility, cellular tropism, replication efficiency, and innate immune restriction. Reservoir hosts such as bats, rodents, birds, and livestock contribute to viral maintenance and diversification through distinct ecological and physiological characteristics, while deforestation, agricultural expansion, wildlife trade, intensive farming, urbanization, and climate variability can increase opportunities for cross-species transmission. Following spillover, viral adaptation and host susceptibility determine whether infections remain sporadic or progress to sustained human transmission. This review integrates ecological, molecular, immunological, and anthropogenic determinants of zoonotic emergence and examines major historical spillover events involving coronaviruses, influenza viruses, filoviruses, henipaviruses, and arboviruses. We further evaluate genomic and metagenomic surveillance, wastewater monitoring, artificial intelligence, ecological modeling, and integrated One Health approaches for early risk assessment and pandemic preparedness. Major knowledge gaps include limited characterization of global viral diversity, surveillance bias, inadequate functional validation of newly identified viruses, fragmented data systems, and limited predictive capacity. Future prevention requires integration of technological innovation with ecological conservation, equitable surveillance capacity, responsible biotechnology governance, and sustainable One Health Planetary Health strategies.

    2026
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    2Characterization and Genomic Analysis of a Jumbo
    Shitian Huo, Pengfei Zhu, Jikai Xu, Kai Wang,Ming Sun,Donghai Peng

    Aeromonas hydrophila is an opportunistic pathogen of fish, humans, and livestock, and has a severe negative impact on aquaculture development. Phage therapy is considered an alternative strategy for controlling bacterial infections and contamination. In this study, a novel phage, Aeromonas hydrophila BMBAH1, was isolated. Transmission electron microscopy showed that phage BMBAH1 had a long tail and an icosahedral head. Biological characterization indicated that phage BMBAH1 remained highly active across a broad range of temperatures and pH values, exhibiting long-term and significant inhibitory effects on host bacteria at an optimal multiplicity of infection (MOI) of 0.1. The genome of phage BMBAH1 is 237 kb in length with a guanine-cytosine (GC) content of 44.3%, and it was identified as a typical jumbo phage and predicted to contain 241 open reading frames (ORFs). Whole-proteome-based phylogenetic analysis, gene-sharing network analysis, and core protein clustering consistently indicated that phage BMBAH1 belongs to the family Chimalliviridae . However, phage BMBAH1 exhibited low intergenomic similarity to previously isolated phages, with values of approximately 30%. These results support the designation of phage BMBAH1 as the representative member of a candidate novel viral genus, designated Southlakevirus . Our findings expand the diversity of A. hydrophila phages and provide a promising genetic resource for further exploring biological characteristics of jumbo phages and developing biocontrol strategies.

    2026
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    3First Evidence of Tahyna Virus in Central Italy and Seasonal Dynamics of Its Putative Vector, Aedes Caspius
    Federico Romiti,Silvia Tofani,Antonella Cersini, Irene Del Lesto,Maria Teresa Scicluna, Gaetana Anita Marcario, Davide La Rocca, Silvia Rondón,Adele Magliano,Claudio De Liberato

    Tahyna virus (TAHV) is a neglected mosquito-borne Orthobunyavirus pathogenic to humans. In Italy, TAHV was first recorded in Friuli Venezia-Giulia and then repeatedly in Emilia Romagna Region (Northern Italy). This study was set up to verify the presence of TAHV in Central Italy and to identify its potential vectors. Mosquito surveillance was conducted from April to November 2025, using 78 CDCCO₂ traps across Latium and Tuscany Regions. A total of 17,728 Culicidae was captured, including 9237 specimens of four potential vector Aedes species (Aedes albopictus, Aedes caspius, Aedes detritus, and Aedes vexans). Aedes caspius was the dominant species, showing a marked abundance peak from late-summer to early-autumn. Additionally, a high density of Ae. vexans, a primary TAHV vector species in Europe, was recorded in Arezzo province, Eastern Tuscany. A total of 356 pools of the Aedes species, made up of 6600 specimens, was screened for TAHV by real-time and conventional PCR. TAHV was detected in one pool of Ae. caspius collected in Grosseto province, Southern Tuscany. This study provides the first report of TAHV in Central Italy, identifying the southernmost detection in the Country to date.

    2026
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    4Roughness-dependent Retention of a Reduced Rabies-Virus Model in a Platinum Nanochannel: a Molecular Dynamics Study
    Narinderjit Singh Sawaran Singh, Murtaja Satea, Ali Jawad Kadhum, Ibrahm Mahariq, Hemn A.H. Barzani, Baydaa Abed Hussein, Mina D. Jumaah, Mahmut Taner,Soheil Salahshour, A. Rahimi

    Capturing nanoscale biological objects in nanochannels depends strongly on surface geometry and interfacial interactions. However, the spatial and temporal limitations of atomistic simulations prevent the direct representation of a complete rabies virion. In this study, we used molecular dynamics simulations to examine the force-driven retention of a reduced rabies-virus model with a characteristic size of approximately 4 nm in a water-filled platinum nanochannel with non-ideal surface roughness. The simulated construct was developed from reported rabies-virus structural information but did not reproduce the complete morphology, envelope, genomic content, or biological functionality of an intact virion. The atomic interactions were described using DREIDING and Universal Force Field parameters, the TIP3P water model, the embedded atom method for Pt–Pt interactions, and Lennard-Jones and Coulombic terms for interfacial interactions. After 10 ns of canonical equilibration at 300 K, the system underwent a 20 ns force-driven production stage. Roughness sizes of 35, 37, 40, and 43 Å were investigated. Among the four simulated configurations, the 40 Å roughness case produced the largest maximum density (0.187 atom/ų), the lowest maximum velocity (0.006 Å/ps), the largest retained surface-mesh volume (31,118 ų), and the most negative reduced-model–Pt interaction energy (−469.91 kcal/mol). The simulation-defined retained fraction for the reduced construct reached 95% at 20 ns. The weaker responses at 43 Å indicated a non-monotonic dependence on roughness size within this model and the investigated geometries. These results characterized the force-driven behavior of a specific 4-nm construct under the stated simulation conditions; they did not establish roughness-dependent capture behavior for intact rabies virions or predict experimental device performance.

    2026
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    5Characterization and Genomic Analysis of a Jumbo Aeromonas Hydrophila Phage BMBAH1, Representing a Candidate Novel Viral Genus
    Shitian Huo, Pengfei Zhu, Jikai Xu, Kai Wang,Ming Sun,Donghai Peng

    Aeromonas hydrophila is an opportunistic pathogen of fish, humans, and livestock, and has a severe negative impact on aquaculture development. Phage therapy is considered an alternative strategy for controlling bacterial infections and contamination. In this study, a novel phage, Aeromonas hydrophila BMBAH1, was isolated. Transmission electron microscopy showed that phage BMBAH1 had a long tail and an icosahedral head. Biological characterization indicated that phage BMBAH1 remained highly active across a broad range of temperatures and pH values, exhibiting long-term and significant inhibitory effects on host bacteria at an optimal multiplicity of infection (MOI) of 0.1. The genome of phage BMBAH1 is 237 kb in length with a guanine-cytosine (GC) content of 44.3%, and it was identified as a typical jumbo phage and predicted to contain 241 open reading frames (ORFs). Whole-proteome-based phylogenetic analysis, gene-sharing network analysis, and core protein clustering consistently indicated that phage BMBAH1 belongs to the family Chimalliviridae. However, phage BMBAH1 exhibited low intergenomic similarity to previously isolated phages, with values of approximately 30%. These results support the designation of phage BMBAH1 as the representative member of a candidate novel viral genus, designated Southlakevirus. Our findings expand the diversity of A. hydrophila phages and provide a promising genetic resource for further exploring biological characteristics of jumbo phages and developing biocontrol strategies.

    2026
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    高被引作者

    作者引用发文
    Eric Snijder196812
    Domingo Esteban186625
    Luis Enjuanes160012
    Roger Jones151915
    X.J. Meng150722
    Allan R. Gould144524
    Charles E. Rupprecht137613
    Michael P. Murtaugh135216
    Eugene Koonin13429
    Robert G. Webster128822

    高产作者

    作者引用发文
    Domingo Esteban186625
    Hans Nauwynck47625
    Allan R. Gould144524
    Nobuhiro Suzuki61624
    Hiroaki Okamoto101823
    X.J. Meng150722
    Robert G. Webster128822
    Ioannis E. Tzanetakis76721
    Ben Berkhout42721
    Masaharu Takahashi56521

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