We present an optimised distributed-memory algorithm for the unpreconditioned conjugate gradient (CG) method. We experiment with using the CG algorithm with the compressed sparse row (CSR), compressed sparse row 5 (CSR5), compressed sparse row 2 (CSR2) and symmetric compressed sparse row (SCSR) sparse matrix formats. For the CG algorithm, we present a CSR5-based and an SCSR-based distributed-memory sparse matrix-vector multiplication (SpMV) algorithm. We developed five distributed-memory CG implementations using different combinations of the mentioned sparse matrix formats and SpMV algorithms. We benchmarked our implementations on a distributed-memory computer cluster with Intel x86-64 CPUs. For the maximum benchmarked number of compute nodes, the median performance of our optimised distributed-memory CG algorithm with CSR-based SpMV was 58
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关键词
Compressed sparse row format,Conjugate gradient method,Distributed-memory algorithm,High-performance computing,Sparse system of linear equations,Sparse matrix-vector multiplication