Fast Nondestructive Readout for High-Clock-Rate Atom Array Quantum Processor

Neutral-atom arrays have rapidly advanced to support thousands of qubits and execute high-fidelity logical operations. However, these processors remain severely throttled by their slowest fundamental operation: nondestructive qubit measurement, which requires milliseconds and fundamentally limits the system's clock rate. This bottleneck arises from both an inherent photon-budget dilemma—sufficient fluorescence for reliable state discrimination must be collected without excessive heating or loss—and frame-based imaging, which imposes one common exposure and decision latency on intrinsically independent, site-local measurements. Here, we overcome these limitations with a fast, nondestructive readout architecture based on real-time, site-resolved adaptive protection. By integrating continuous photon counting with a dynamic feedforward framework, we decode qubit states with sub-microsecond latency and instantly shield atoms from redundant scattering. Demonstrated in parallel across a 100-qubit reconfigurable atom array, with adaptive protection on a 25-site subarray, this dynamic decision protocol reduces the average probe time to just 15 μs. Model-free benchmarking yields a discrimination infidelity of 4.1 × 10^-5 and an atom loss of 2.1 × 10^-4, simultaneously setting new performance records for atom arrays. Exploiting this capability, we operate repeated quantum circuits at an unprecedented 1.7 kHz clock rate with atoms reused over 120 consecutive rounds—nearly sevenfold higher than the previous record—and enter the sub-millisecond cycle regime for the first time. By removing nondestructive readout as the dominant cycle-time bottleneck, this work unlocks high-clock-rate mid-circuit syndrome extraction, paving the way for high-throughput, fault-tolerant quantum computation.