JASPAR TFBS LOLA Databases - Part 1

Anne‐Lise Børresen‐Dale, Rafael Riudavets Puig,Ieva Rauluševičiūtė, Roza Berhanu Lemma,Laura Turchi,Romain Blanc-Mathieu,Jérémy Lucas, Paul Boddie,Aziz Khan, Nicolás Manosalva Pérez,Oriol Fornés, Tiffany Y. Leung, Alejandro Aguirre,Fayrouz Hammal,Daniel Schmelter, Damir Baranašić,Benoît Ballester,Albin Sandelin,Boris Lenhard,Klaas Vandepoele, Wyeth W. Wasserman,François Parcy,Anthony Mathelier

Zenodo (CERN European Organization for Nuclear Research)（2022）

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摘要

This repository contains the first part of the JASPAR 2022 LOLA databases used by the JASPAR TFBS enrichment tool. For each organism, we provide the LOLA databases for all JASPAR 2022 TFBS sets as compressed directories containing a set of .RDS R objects. Databases are organised by genome assembly. Due to file sizes, we had to split the repository into two different parts. Part 2 of the repository containing the databases for human can be found here.

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