The current study aims to model the potential energy surface (PES) of three much less investigated hydroxyaryl(hetaryl)idene azomethine imine derivatives, possessing the same proton crane unit—namely the azomethine imine moiety—but slightly differing in the structure of the proton transfer platform (stator), by applying the tools of computational chemistry. The obtained calculational results are compared with already reported experimental structural, 1H NMR, and UV absorption spectra in an attempt to shed light on the observed data, mainly with regard to the efficiency of the excited state intramolecular proton transfer.

The tautomeric behavior of 1-(2-pyridinyl)-1H-pyrazol-5-ols has been investigated in solution using UV-vis and NMR spectroscopies and DFT quantum-chemical calculations. The study has been focused on the influence of the molecular structure, solvents, and acid addition protonation. The tautomerism has been considered in light of the possible long-range intramolecular proton transfer and tautomeric switching under irradiation. The results demonstrate that the possibilities for photoswitching are limited due to specific structural factors preventing population and stabilization of the end keto tautomer. At the same time, a very rare case of a middle-range OH/CH proton transfer can be achieved by acid addition.

The question of verification of food quality has stood before scientists since ancient times, and, nowadays, the advances in science and technology have made it a very challenging task. Laser-induced fluorescence (LIF) spectroscopy has become a very useful instrument for sample characterization. Nevertheless, analysis of complex multi-component spectra is difficult to approach. In recent years, the capabilities of artificial intelligence have attracted a lot of attention, as they open doors to efficient solutions of many problems that otherwise require a lot of time, effort, expenses and often inspiration. In the present work, we use LIF spectra of mixtures of sunflower and extra virgin olive oils with different concentrations and apply neural network (NN) algorithms with the aim of improving the strategies for concentration determination. Two different approaches have been applied and their output has been compared and commented. More specifically, the task of concentration recognition has been targeted as a classification and as a fitting problem. We formulate four diagnostic parameters with biochemical meaning and compare the NN performance when training with raw spectra and with the diagnostic parameters. The correct choice of appropriate diagnostic parameters is of importance from the point of view of biochemical interpretability and analysis, whereas “black box” full-spectra training might be beneficial for end-user applications. Our results show that these methods perform well even with very scarce data and outline preliminary strategies for defining diagnostic criteria.

The white oil-bearing rose (R. alba L.) is the second of the industrially important rose species for Bulgarian rose cultivation and essential oil production. In recent years, the interest in white oil-bearing rose has increased, following the worldwide trend for searching for new aromatic alternatives. Therefore, the purpose of the current research is to evaluate the volatile compounds profile of fresh R. alba L. flowers using headspace solid-phase microextraction (HS-SPME) and gas chromatography-mass spectrometry (GC/MS). More than 75 individual compounds were identified and quantified using HS-SPME-GC/MS. The study revealed that the aroma-bearing fraction of rose volatiles consists mainly of monoterpene alcohols; 2-phenylethanol was the most abundant component (8.4–33.9%), followed by geraniol (12.8–32.5%) and citronellol + nerol (17.7–26.5%). Linalool, α-pinene, β-myrcene, and rose oxides were also observed in low concentrations. The stearopten fraction in the HS phase was observed in low concentration, with main representatives nonadecane + nonadecene, heptadecane, heneicosane, and tricosane. The HS-GC profile of the R. alba fresh flowers shows distinct differences in relative abundance of the components between the two studied clones of the population, as well as between volatiles in petals and in the whole blossom. The absence of some undesirable components, such as allergenic and potentially carcinogenic methyl eugenol in fresh R. alba blossom, makes white oil-bearing rose a promising alternative to R. damascena in perfumery, natural cosmetics, and aromatherapy.

In our opinion the Reply does to answer the question which we raised and in some extend distorts the facts. Therefore, we have decided to reply in a short and concentrated way.

Tautomerism in two new azo dyes, based on 7-hydroxyquinoline, has been considered from the viewpoint of the proton crane concept. Although 8-(phenyldiazenyl)quinolin-7-ol exists in solution as a mixture of azo and two hydrazone tautomers, as shown by the experimental and theoretical results, upon irradiation switching, based on long-range proton transfer, occurs in a limited extent. 8-(4-Hydroxy-1,2,3,5-tetrafluorophenyldiazenyl)quinolin-7-ol exists as a single enol (azo) tautomer and the reduced basicity of the azo group nitrogen atoms does not allow shift of the tautomeric state neither upon changing the solvent, nor upon irradiation. Possibilities for molecular design, allowing to improve the capacity of 7-hydroxy-8-(azophenyl)quinolines, are considered in terms of stabilization of the azo tautomer and making possible long range proton transfer to the quinolyl nitrogen atom.

Dithienylethenes (DTE) are a rare class of photoswitches, which are capable of undergoing a fast photochemical cyclization leading to increased aromaticity of the closed isomer. At the same time in most of the tautomeric compounds the tautomeric state is strongly affected by the change in the aromaticity of the involved aromatic rings. Very recently it has been shown that the implementation of DTE moiety in salicylideneaniline leads to switching of the stable open form enol tautomer to thermodynamically stable keto tautomer upon cyclization. In the present communication we consider in depth, by using DFT and TD-DFT methodology, the reasons for low efficiency of these new switches and further develop the idea for DTE based switching in proton cranes.

The chemical composition of Rosa alba L. aromatic products extracted with liquified 1,1,1,2-tetrafluoroethane (freon R134a) has been evaluated in static and dynamic modes of extraction. The yield varies in the range 0.039–0.048% for the different variants. In order to reveal the chemical composition and aroma profile of the extracts, they were analyzed by means of gas chromatography-mass spectrometry (GC-MS) and gas chromatography with flame ionization detection (GC/FID). As a result of the analysis, more than 80 compounds with concentrations higher than 0.01% were identified and quantified in the extracts, representing 92.7, 88.4, and 88.0% of the total content. The study indicated that 2-phenyl ethanol (12.57–14.97%), geraniol (12.09–14.82%), nerol (5.90–6.39%), benzyl alcohol (3.63–5.34%), and citronellol (3.21–4.04%) were the main components of the aroma-bearing fraction. The solid phase consists mainly of nonadecane+nonadecene (15.21–16.85%), heneicosane (11.81–13.78%), and tricosane (2.46–2.96%). In addition, olfactory evaluation of the extracts was performed. The comprehensive assessment of the quantitative and qualitative characteristics of the extracts indicates that the static, one-stage mode is the most appropriate for the subcritical extraction of R. alba blossoms with freon R134a.

Previously, we have described a successful molecular switch (8-(benzo[d]thiazol-2-yl)quinolin-7-ol), working on the basis of long-range proton transfer. Bearing in mind that its switching efficiency in low-polarity aprotic solvents is not sufficient, in the current communication, we investigate in detail the effect of the substitution in the benzothiazole ring. By using the DFT approach, the ground-state stability of the tautomeric forms, involved in the switching process, is modeled with the aim of finding conditions where clean switching could be possible in variety of aprotic solvents. The results indicate that the substitution with electron-acceptor substituents could increase the switching efficiency, but the overall improvement depends on the positions and electronic effect of the particular substituent.

In a paper of Zhu and co-workers (“Study of the electronic effect and quantitative spectra predictions of o-methoxyanilineterminated monoazonaphthols: a combined experimental and DFT study” by Guoxun Zhu, Yan Lin, Wenxian Zhou, Huacan Song and Zhengquan Li, RSC Advances, 2023, 13, 33736), the authors derived a protocol for the absorption spectra prediction is sulphonated azo naphthols assuming that they exist as single azo tautomers. However, as it is well known before and as shown by the available experimental data and the calculations, performed in this note, the studied dyes exist almost solely in hydrazone tautomeric form, which unavoidably affects the conclusions and linear relations made in the original paper. A detailed benchmarking on the spectra prediction, involving 39 density functionals (33 of them hybrid and 6 – pure) indicates that there is no a functional correctly predicting the absorption spectra of the hydrazone tautomers in azo naphthols.

Long-range proton transfer in several conjugated proton cranes, originating from 7-hydroxy quinoline as a proton transfer platform, has been investigated theoretically by means of DFT and TD-DFT methodology. Major emphasis was given to their applicability to provide clean switching upon irradiation. The border conditions require the existence of a single enol tautomer in the ground state, which under excitation through a series of consecutive exited and ground state intramolecular proton transfer steps is transferred to the keto tautomer. It was shown that the most suitable candidates are based on using iso-quinoline, pyrimidine and 4-nitropyridine as proton crane units. Their suitability is a function of aromaticity changes, the basicity of the nitrogen atom from the proton crane unit and the structural effects originating from their conjugation with 7-hydroxy quinoline.

In the paper of Zhu and co-workers, cited in the title, the authors derived a protocol for the absorption spectra prediction is sulphonated azo naphthols assuming that they exist as single azo tautomers. However, as shown by the available experimental data and the calculations, performed in this note, the studied dyes exist almost solely in hydrazone tautomeric form, which unavoidably affects the conclusions and linear relations made in the original paper.

Coronavirus disease 2019 (COVID-19) still remains the most disastrous infection continuously affecting millions of people worldwide. Herein, we performed a comparative study between the anti-influenza drug favipiravir (FAV) and the anti-thalassemia drug deferiprone (DFP) in order to examine their potential as basic scaffolds for the generation of most effective and structurally novel antivirals. To conduct the initial molecular modelling and virtual screening steps, our recently proposed single crystal X-ray diffraction (SCXRD)/HYdrogen DEssolvation (HYDE) technology platform has been used. This platform allows molecular design, interactive prioritization and virtual evaluation of newly designed molecules, simultaneously affecting two COVID-related targets, including angiotensin-converting enzyme 2 (ACE2) as a host-cellular receptor (host-based approach) and the main protease (Mpro) enzyme of the spike glycoprotein of SARS-Cov-2 (virus-based approach). Based on the molecular docking results, DFP has shown higher binding affinity (Ki HYDE values) over FAV towards both biological targets. The tautomeric, physicochemical, and biological properties of FAV and DFP have been studied both experimentally and theoretically using molecular spectroscopy (UV-VIS absorption), parallel artificial membrane permeability assay, and cell biology (PAMPA and MTT assay), as well as DFT quantum chemical calculations. According to the obtained results, the enol tautomers of both compounds are considerably more stable in different organic solvents. However, the keto tautomer of FAV was estimated to be most preferable under physiological conditions, which is in good agreement with the molecular docking studies. The isolated crystal structure of DFP is in an excellent agreement with the computation in respect of the most stable tautomer. Combined single X-ray/molecular modeling studies including HYDE analyses provided not only insights into the protein-ligand interactions within the binding site of SARS-Cov-2-ACE2 and SARS-Cov-2-Mpro, but also a valuable information regarding the most stable enol tautomeric form of DFP that contributes to its estimated higher potency against these targets.

The effect of the external electric field on the ground-state tautomerism in 8-(benzo[d]thiazol-2-yl)quinolin-7-ol has been studied by using density functional theory. The compound exists as an enol tautomer (off state) and under the influence of the external electric field a long-range intramolecular proton transfer can occur, placing the tautomeric proton at the quinolyl nitrogen atom (on state). This is a result of the much higher dipole moment of the end keto tautomer and indicates that the external electric field can be used to mimic the implicit solvent effect in tautomeric systems. In the excited state, the further stabilization of the most polar on state leads to a situation when the excited-state intramolecular proton transfer becomes impossible, limiting the intramolecular rotation to the conical intersection region.

Herein, the detailed mechanism of intramolecular proton transfer in molecular switches, constructed from 7-hydroxy quinoline substituted in the eight-position C-C single axle, connected to three different proton cranes (morpholine, piperidine, and 1,3,5-dioxazine), was investigated by means of theoretical chemistry. The theoretical interpretation of the rotational mechanism and its stable structures were proposed for the well-known Varma's proton crane, based on morpholine molecule. The reliability of the theoretical simulations was confirmed by the available literature data from time-dependent IR measurements.

New proton cranes based on 7-hydroxy-quinoline and 3-hydroxypyridine.

Herein, we demonstrate a working prototype of a conjugated proton crane, a reversible tautomeric switching molecule in which truly intramolecular long-range proton transfer occurs in solution at room temperature. The system consists of a benzothiazole rotor attached to a 7-hydroxy quinoline stator. According to the experimental and theoretical results, the OH proton is delivered under irradiation to the quinolyl nitrogen atom through a series of consecutive proton transfer and twisting steps. The use of a rigid rotor prevents undesired side processes that decrease the switching performance in previously described proton cranes and provides an unprecedented switching efficiency and fatigue resistance. The newly designed system confirms the theoretical concept for the application of proton transfer-initiated intramolecular twisting as the switching mechanism, developed more than 10 years ago, and provides unique insights for the further development of tautomeric molecular switches and motors, molecular logic gates, and new molecular-level energy storage systems.