A simple rapid process for semi-automated brain extraction from magnetic resonance images of the whole mouse head

Adam Delora,Aaron Gonzales, C S Medina,Adam Mitchell,Abdul Faheem Mohed,Russell E Jacobs,Elaine L Bearer

Journal of Neuroscience Methods（2016）

引用 25|浏览7

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摘要

•We present a new software tool for automated mouse brain extraction.•The new software tool is rapid and applies to any MR dataset.•We validate the output by comparing with manual extraction (the gold standard).•Brain extraction with this tool preserves individual volume, and improves alignments.

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关键词

Mouse brain extraction,Automated skull stripping,Magnetic resonance imaging,Freeware,Software tools

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