Nipah Virus Sequences from Humans and Bats during Nipah Outbreak, Kerala, India, 2018.

Pragya D Yadav,Anita M Shete, G Arun Kumar,Prasad Sarkale,Rima R Sahay,Chandni Radhakrishnan,Rajen Lakra,Prachi Pardeshi,Nivedita Gupta,Raman R Gangakhedkar, V R Rajendran,Rajeev Sadanandan,Devendra T Mourya

EMERGING INFECTIOUS DISEASES（2019）

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摘要

We retrieved Nipah virus (NiV) sequences from 4 human and 3 fruit bat (Pteropus medius) samples from a 2018 outbreak in Kerala, India. Phylogenetic analysis demonstrated that NiV from humans was 96.15% similar to a Bangladesh strain but 99.7%-100% similar to virus from Pteropus spp. bats, indicating bats were the source of the outbreak.

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关键词

Human,India,Kerala,Nipah virus,Pteropus medius,next-generation sequencing,qRT-PCR,viruses

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