Phylogenetic double placement of mixed samples

Metin Balaban
Metin Balaban

BIOINFORMATICS, pp. 335-343, 2020.

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Abstract:

Motivation: Consider a simple computational problem. The inputs are (i) the set of mixed reads generated from a sample that combines two organisms and (ii) separate sets of reads for several reference genomes of known origins. The goal is to find the two organisms that constitute the mixed sample. When constituents are absent from the ref...More

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