Genome/transcriptome analysis of the chigger mite Leptotrombidium pallidum, a major vector for scrub typhus, with a special focus on genes more abundantly expressed in larval stage
Journal of Asia-Pacific Entomology(2020)
摘要
•The genome size of L. pallidum was determined to be 193 Mb and 15,842 genes were predicted.•A total of 10,885 protein-coding genes were constitutively expressed in all four stages.•A total of 4,078 genes were differentially expressed in all four stages.•Whole genome amplification is a reliable option for genome sequencing of a single tiny individual.
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关键词
Leptotrombidium,Scrub typhus,Genome analysis,Transcriptome analysis,De novo assembly,Gene prediction,Chigger mite
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