Colpodean ciliate phylogeny and reference alignments for phylogenetic placements

Ľubomír Rajter,Isabelle Ewers,Nadine Graupner,Peter Vďačný,Micah Dunthorn

European Journal of Protistology（2021）

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摘要

•A molecular signal from SSU-rRNA favor “platyophryids-early” topology over alternative “bursariomorphids-early” topology of the class Colpodea•We provide colpodean reference alignments for phylogenetical placement of metabarcoding data•We propose ecological/functional interpretations of those placements

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关键词

Ciliophora,Colpodea,diversity,environmental sequencing,HTS

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