The chloroplast genome of Prunus zhengheensis: Genome comparative and phylogenetic relationships analysis

•The chloroplast genome of Prunus zhengheensis was reported for the first time.•The chloroplast genomes of P. zhengheensis was compared with other Prunus plants.•We analysis phylogenetic relationships between P. zhengheensis and other Prunus species.•The results provided important information for the genetic evolution of P. zhengheensis.