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Functional Polymorphisms of DNA Repair Genes in Latin America Reinforces the Heterogeneity of Myelodysplastic Syndrome

Daniela de Paula Borges, Rinna Maria Arruda Rodrigues dos Santos,Elvira Rodrigues Pereira Velloso, Howard Lopes Ribeiro Jr,Irene Beatriz Larripa, Maria Fernanda Camacho,Jacqueline Gonzalez, Leandro Daniel Burgos Pratx,Silvia Maria Meira Magalhaes,Carolina Barbara Belli,Ronald Feitosa Pinheiro

Hematology, Transfusion and Cell Therapy(2023)

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摘要
Nucleotide excision repair pathway (NER) is an essential mechanism for single-strand breaks (SSB) repair while xeroderma pigmentosum family (XPA to XPG) is the most impor-tant system to NER. Myelodysplastic syndrome (MDS) is a heterogeneous hematological cancer characterized by cytopenias and risk of acute myeloid leukemia (AML) transforma-tion. MDS pathogenesis has been associated with problems of DNA repair system. This report aimed to evaluate NER polymorphisms (XPA rs1800975, XPC rs2228000, XPD rs1799793 and XPF rs1800067) in 269 MDS patients of different populations in Latin America (173 Brazilian and 96 Argentinean). Genotypes were identified in DNA samples by RT-qPCR using TaqMan SNP Genotyping Assay. Regarding rs1799793 polymorphism of XPD for Bra-zilian population, the heterozygous genotype AG presented a high odds ratio (OR) to have a normal karyotype (p = 0.012, OR=3.000) and the mutant homozygous genotype AA was asso-ciated to a high OR of AML transformation (p = 0.034, OR=7.4). In Argentine population, the homozygous mutant AA genotype of rs1800975 polymorphism of XPA was associated with an increased odd to have hemoglobin levels below 8g/dL (p = 0.013, OR=10.000) while for the rs1799793 polymorphism of XPD, the heterozygous AG genotype decreased OR to be classi-fied as good (p < 0.001, OR=9.05 & POUND; 10-10), and intermediate (p < 0.001, OR=3.08 & POUND; 10-10), according to Revised-International Prognostic Scoring System. Regarding the rs1800067 polymorphisms of XPF, the homozygous mutant AA genotype showed a decreased OR to be classified as good (p < 0.001, OR=4.03 & POUND; 10-13) and intermediate (p < 0.001, OR=2.54 & POUND; 10_13). Our report reinforces the heterogeneity of MDS and demonstrates the importance of ethnic differences and regional influences in pathogenesis and prognosis of MDS.& COPY; 2021 Associacao Brasileira de Hematologia, Hemoterapia e Terapia Celular. Published by Elsevier Espana, S.L.U. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
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关键词
Myelodysplastic syndrome,DNA damage,Functional polymorphism,DNA repair,NER
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