Isolation, structural elucidation and molecular docking studies against SARS-CoV-2 main protease of new stigmastane-type steroidal glucosides isolated from the whole plants of Vernonia gratiosa .

Natural product research(2022)

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摘要
Phytochemical investigation of the whole plants of Hance. led in the isolation and identification of two new stigmastane-type steroidal glucosides (-), namely vernogratiosides A (), and B (). Their chemical structures were fully elucidated based on 1 D/2D NMR spectroscopic, HR-ESI-MS data analyses, and by producing derivatives by chemical reactions. The binding potential of the isolated compounds to replicase protein - main protease of SARS-CoV-2 were examined using the molecular docking simulations. Our results show that the isolated steroidal glucosides (-) bind to the substrate-binding site of SARS-CoV-2 main protease with binding affinities of -7.2 and -7.6 kcal/mol, respectively, as well as binding abilities equivalent to N3 inhibitor that has already been reported (-7.5 kcal/mol).
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关键词
Molecular docking,SARS-CoV-2 main protease,Vernonia gratiosa,stigmastane-type steroidal glucoside
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