FIT-GWA: A new method for the genetic analysis of small gene effects, high precision in phenotype measurements and small sample sizes

biorxiv(2022)

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摘要
Small gene effects involved in complex traits remains difficult to analyse using current genome-wide association methods (GWAS) due to the number of individuals required to return meaningful association(s), a.k.a. study power. Inspired by physics fields theory we provide a different method called Fields Informational Theory for Genome-Wide Associations (FIT-GWA). Contrary to GWAS, FIT-GWA that the phenotype is measured precisely enough and/or the number of individuals in the population is too small, to permit categories. To extract information FIT-GWA use the difference in the cumulated sum of gene microstates between two configurations: (i) when the individuals are taken at random without information on phenotype values and, (ii) when individuals are ranked as a function of their phenotype value. Such difference can be accounted through the emergence of ‘phenotypic fields’. We demonstrate that FIT-GWA recovers GWAS, i.e., Fisher’s theory, when the phenotypic fields are linear. However, unlike GWAS, FIT-GWA permits to demonstrate how the variance of microstate distribution density functions are also involved in genotype-phenotype associations. Using genotype-phenotype simulations based on Fisher’s theory we illustrate the application and power of the method with a small sample size of 1000 individuals. ### Competing Interest Statement The authors have declared no competing interest.
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