Rhizobium croatiense sp. nov. and Rhizobium redzepovicii sp. nov., two new species isolated from nodules of Phaseolus vulgaris in Croatia

Phaseolus vulgaris is a legume indigenous to America which is nodulated by strains of genus Rhizobium in Croatia. Four of these strains, 13TT, 9T, 18TT and 8Z are phylogenetically close to the species from the Rhizobium leguminosarum phylogenetic complex in the 16S rRNA gene analysis. The results of both the analyses of the concatenated recA and atpD genes and whole genomes revealed that the strains 13TT and 9T clustered with Rhizobium sophoriradicis CCBAU 03470T and the strains 18TT and 8Z with Rhizobium ecuadorense CNPSO 671T. Whole genome average nucleotide identity blast (ANIb) and dDDH values between the strains 13TT and the type strain of R. sophoriradicis and between the strains 18TT and the type strain of R. ecuadorense were lower than 95% and 70%, respectively, which are the threshold values recommended for bacterial species differentiation. These results combined with those of chemotaxonomic and phenotypic analyses support the affiliation of these strains to two novel species within the genus Rhizobium for which we propose the names Rhizobium croatiense sp. nov. 13TT (=LMG 32397T, = HAMBI 3740T) as type strain and Rhizobium redzepovicii sp. nov. 18TT (=LMG 32398T, = HAMBI 3741T) as type strain.