The Single Residue K12 Governs the Exceptional Voltage Sensitivity of Mitochondrial Voltage-Dependent Anion Channel Gating

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY(2022)

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摘要
The voltage-dependent anion channel (VDAC) is a fibarrel channel of the mitochondrial outer membrane (MOM) that passively transports ions, metabolites, polypeptides, and single-stranded DNA. VDAC responds to a transmembrane potential by & ldquo;gating,& rdquo; i.e. transitioning to one of a variety of low-conducting states of unknown structure. The gated state results in nearly complete suppression of multivalent mitochondrial metabolite (such as ATP and ADP) transport, while enhancing calcium transport. Voltage gating is a universal property of fi-barrel channels, but VDAC gating is anomalously sensitive to transmembrane potential. Here, we show that a single residue in the pore interior, K12, is responsible for most of VDAC & rsquo;s voltage sensitivity. Using the analysis of over 40 & micro;s of atomistic molecular dynamics (MD) simulations, we explore correlations between motions of charged residues inside the VDAC pore and geometric deformations of the fi-barrel. Residue K12 is bistable; its motions between two widely separated positions along the pore axis enhance the fluctuations of the fi-barrel and augment the likelihood of gating. Single channel electrophysiology of various K12 mutants reveals a dramatic reduction of the voltage-induced gating transitions. The crystal structure of the K12E mutant at a resolution of 2.6 & Aring; indicates a similar architecture of the K12E mutant to the wild type; however, 60 & micro;s of atomistic MD simulations using the K12E mutant show restricted motion of residue 12, due to enhanced connectivity with neighboring residues, and diminished amplitude of barrel motions. We conclude that fi-barrel fluctuations, governed particularly by residue K12, drive VDAC gating transitions.
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