Deep6: Classification of Metatranscriptomic Sequences into Cellular Empires and Viral Realms Using Deep Learning Models.

Jan F Finke,Colleen T E Kellogg,Curtis A Suttle

Microbiology resource announcements（2023）

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摘要

Deep6 is a deep learning model that classifies metatranscriptomic sequences as short as 250 nucleotides into prokaryotes, eukaryotes, or one of the four viral realms, using a reference-independent and alignment-free approach. Average accuracies range from 0.87 to 0.97, depending on sequence length.

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关键词

metatranscriptomic sequences,viral realms,deep6 learning,cellular empires

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