Morphological and genomic characteristics of two novel actinomycetes, Ornithinimicrobium sufpigmenti sp. nov. and Ornithinimicrobium faecis sp. nov. isolated from bat faeces ( Rousettus leschenaultia and Taphozous perforates ).

Frontiers in cellular and infection microbiology(2023)

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摘要
Four Gram-staining-positive, aerobic, non-motile, circle-shaped bacteria were isolated from the faeces of bats ( and ) collected from Guangxi autonomous region (E106°49'20″, N22°20'54″) and Yunnan province (E102°04'39″, N25°09'10″) of South China. Strains HY006 and HY008 shared highly 16S rRNA gene sequence similarity to those of W204 (99.3%) and CPCC 203535 (97.3%), while the strains HY1745 and HY1793 were closest to the type strains H23M54 (98.7%), CFH 30183 (98.3%), and 01-Gi-040 (98.1%). Furthermore, when compared to the other members of the genus , the digital DNA-DNA hybridization and average nucleotide identity values of the four novel strains were within the ranges of 19.6-33.7% and 70.6-87.4%, respectively, both of which were below the respective recommended cutoff values of 70.0% and 95-96%. Significantly, strain HY006 was resistant to chloramphenicol and linezolid whereas strain HY1793 was resistant to erythromycin, clindamycin (intermediately), and levofloxacin (intermediately). The main cellular fatty acids (>20.0%) of our isolates were -C and -C. Strains HY006 and HY1793 contained ornithine as the diagnostic diamino acid, also along with the alanine, glycine and glutamic acid in their cell wall. Based on phylogenetic, chemotaxonomic and phenotypic analyses, these four strains could be classified as two novel species of the genus , for which the names sp. nov. and sp. nov. are proposed. The type strains are HY006 (=CGMCC 1.16565 =JCM 33397) and HY1793 (=CGMCC 1.19143 =JCM 34881), respectively.
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Ornithinimicrobium faecis,Ornithinimicrobium sufpimenti,antibiotic sensitivity,bats,carotenoids,genome characteristics
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