Compensating small data with large filters for accurate liver vessel segmentation

Abstract Background: Segmenting liver vessels on computed tomography images is essential for diagnosing liver diseases, planning surgeries and delivering radiotherapy. Nevertheless, identifying vessels is a challenging task due to the tiny cross-sectional areas occupied by vessels, which has posed great challenges for vessel segmentation, such as limited features to be learned and difficult to construct high-quality as well as large-volume data. Methods: We present an approach that only requires a few labeled vessels but delivers significantly improved results. Our model starts with vessel enhancement by fading out liver intensity and generates candidate vessels by a classifier fed with a large number of image filters. Afterwards, the initial segmentation is refined using Markov random fields. Results: In experiments on the well-known dataset 3D-IRCADb, the accuracy is improved to 0.99, and the averaged Dice coefficient is lifted to 0.63. These results are significantly better than those obtained from existing machine-learning approaches and comparable to those generated from deep-learning models. Conclusion: Sophisticated integration of large number filters is able to pinpoint effective features from liver images that are sufficient to distinguish vessels from other liver tissues under a scarcity of large-volume labeled data. The study can shed light on medical image segmentation, especially for those without sufficient data.