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    Trends in Bioinformatics

    Trends in Bioinformatics

    JournalISSN 1994-7941eISSN 2077-2254

    年发文量

    研究主题

    论文(61)

    排序
    1Validation of Isolate Stability Status and in Silico Characterization of SARS-COV 2 Partial CdsRdRP Gene Sequences
    Godwin Michael Ub, Joseph K. Ebigwai,Ndem E. Edu,Paul B. Ekpo,Solomon I. Ofem

    Background and Objective: In December 2019, patients diagnosed with viral pneumonia due to an unidentified microbial agent were reported in Wuhan, China.A novel coronavirus was subsequently identified as the causative pathogen, provisionally named 2019 novel coronavirus (COVID 19).The article aimed to unmask the genetic stability and nature of the viruses and validated the safety guidelines adopted for the coronaviruses currently causing the global pandemic.Materials and Methods: This study uses in silico approach and bioinformatics tools to validate the stability status and characteristics of the novel SARS-COV 2 coronaviruses by retrieving nucleotide sequences isolated and deposited in the NCBI.Results: The results have revealed that 11 out of 12 isolates studied are genetically and thermally unstable.The aliphatic index ranged from 52.98-112.07 in MT187977.1-MT127116.1,respectively.The instability index among the sequences ranged from 39.58-73.65 in MT187977.1-MT152900.1 isolate, respectively.The G-C contents range from 37.28-49.26% in MN938385.1-MT187977.1,respectively.Phylogenetically, isolates MT127116.1,MT159778.1,MT050414.1 and MT042777.1 showed the same genetic and mutation pathway with an evolutionary distance of 0.4 and 0.8 divergence times relative to the last common ancestor.Conclusion: There is a need for concerted effort in studying and understanding the genetic and thermal stability status and other characteristics of the viruses to be able to find a suitable therapy and drug design for the pandemic and biosecurity of humans against the virus now and in the future.

    2021
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    2In Silico and in Vitro: Alpha-bulnesene Fraction from Patchouli Oil As Prostaglandin H2 Synthase Inhibitor Selective
    Sentot Joko Rahar,Takheshi Kikuchi,Fatchiyah
    2020
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    3Transcriptional Patterns of High-Risk Human Papillomavirus Types 16, 18, 45, 68b Genes
    Arkom Chaiwongko,Masahide Seki,Yutaka Suzuki, Teerasit Techawiwat, Parvapan Bhattarako
    2020引用:2
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    4In silico Modelling and Molecular Docking Insight of Bacterial Peptide for Anti-tubercular and Anticancer Drug Designing
    Ameer Khusro,Chirom Aarti,Paul Agastian
    2019
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    5Study on Role of Homology in Prediction of Protein Structure and Challenges of Homology
    Bhaludra Chandra Sekhar Sin
    2019
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    立即登录,查看全部 61 篇论文

    高被引作者

    作者引用发文
    Kumar Ajay253
    Sitansu Kumar Verma252
    El Hassen Mokrani241
    Chikhi Abdelouahab241
    khadidja soulef hio241
    soumia teniou241
    Hanane Boucherit241
    Merzoug Amina241
    Abderrahmane Bensegueni241
    Usman Sumo Friend Tambunan232

    高产作者

    作者引用发文
    Kumar Ajay253
    Krishnan Sundar92
    Arli Aditya Parikesit232
    Sitansu Kumar Verma252
    Krishna Kumar Ojha02
    Arul Mugilan112
    Usman Sumo Friend Tambunan232
    Ashok Selvaraj31
    Chadamala SRINIVASA Kalyan11
    Ekei Victor Ikpeme71

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