Phytochemical investigations on Lepidium sativum L. seeds led to the isolation and structural elucidation of eight secondary metabolites, including two lignan glucosides (1-2), three uridine derivatives (3-5), and three aromatic compounds (6-8). The structures of isolated compounds were unambiguously established by comprehensive spectroscopic methods, including 1D and 2D NMR experiments and high-resolution electrospray ionization mass spectrometry (HR-ESI-MS). All these compounds were discovered from L. sativum for the first time. Notably, three uridine derivatives, lepidiumuridine C (3), lepidiumuridine A (4), and lepidiumuridine K (5), were strictly distributed in L. sativum and L. apetalum, n-benzylformamide (6) was only found in L. sativum and L. meyenii, and 2-(4-hydroxyphenyl)ethanenitrile (7) only existed in several plants of Brassicaceae, supporting their potential as chemotaxonomic markers. These findings enhance the chemical profile of L. sativum and contribute to a better understanding of its systematic position within Brassicaceae.