‘Hidden hunger’ occurs in humans and livestock and stems from deficiencies in microelements, essential amino acids, and vitamins. Triggered by insufficient intake of micronutrients in food and feed, even when macronutrients are abundant, hidden hunger can result in the development of serious diseases and pathological conditions. Finding sufficient micronutrients is often challenging because they are either obtained from limited external natural sources or synthesised de novo . Soil-dwelling saprophages comprise one of the largest proportions of zoomasses on Earth but remain surprisingly overlooked as a potential micronutrient source. To assess their nutritional content concerning micronutrients, we selected 31 invertebrate species obtained from natural ecosystems of European Russia or widely cultivated species originating mainly from tropical regions. They belong to major soil saprophage taxa: cockroaches (Blattodea), beetle (Coleoptera) larvae and imagoes, springtails (Collembola), millipedes (Diplopoda), fly (Diptera) larvae, earthworms (Haplotaxida), woodlice (Isopoda), crickets (Orthoptera). We assessed their proteinogenic amino acid, microelement, and vitamin composition. Taxonomic differences in the composition and ratio of micronutrients were determined and we identified specific taxa naturally enriched with micronutrients for future consideration as potential candidates for incorporation into food and feed supplements to alleviate hidden hunger in livestock and humans.

Newcastle disease virus (NDV) is an enveloped paramyxovirus. The matrix protein of the virus (M-NDV) has an innate propensity to produce virus-like particles budding from the plasma membrane of the expressing cell without recruiting other viral proteins. The virus predominantly infects the host cell via fusion with the host plasma membrane or, alternatively, can use receptor-mediated endocytic pathways. The question arises as to what are the mechanisms supporting such diversity, especially concerning the assembling and membrane binding properties of the virus protein scaffold under both neutral and acidic pH conditions. Here, we suggest a novel method of M-NDV isolation in physiological ionic strength and employ a combination of small-angle X-ray scattering, atomic force microscopy with complementary structural techniques, and membrane interaction measurements to characterize the solution behavior/structure of the protein as well as its binding to lipid membranes at pH 4.0 and pH 7.0. We demonstrate that the minimal structural unit of the protein in solution is a dimer that spontaneously assembles in a neutral milieu into hollow helical oligomers by repeating the protein tetramers. Acidic pH conditions decrease the protein oligomerization state to the individual dimers, tetramers, and octamers without changing the density of the protein layer and lipid membrane affinity, thus indicating that the endocytic pathway is a possible facilitator of NDV entry into a host cell through enhanced scaffold disintegration.IMPORTANCE The matrix protein of the Newcastle disease virus (NDV) is one of the most abundant viral proteins that regulates the formation of progeny virions. NDV is an avian pathogen that impacts the economics of bird husbandry due to its resulting morbidity and high mortality rates. Moreover, it belongs to the Avulavirus subfamily of the Paramyxoviridae family of Mononegavirales that include dangerous representatives such as respiratory syncytial virus, human parainfluenza virus, and measles virus. Here, we investigate the solution structure and membrane binding properties of this protein at both acidic and neutral pH to distinguish between possible virus entry pathways and propose a mechanism of assembly of the viral matrix scaffold. This work is fundamental for understanding the mechanisms of viral entry as well as to inform subsequent proposals for the possible use of the virus as an adequate template for future drug or vaccine delivery.

This review analyzes and summarizes some actual models of raft organization as dynamic structural units in lipid membranes emphasizing the discrimination between mechanisms influencing raft nanodomain formation and maintenance in biological and model membranes on one hand and the roles of membrane proteins on the other. The contentious issue of specific input of cholesterol recognizing/interacting amino acid consensus (CRAC) motifs in the membrane rafts and protein interaction mechanism at the molecular level is discussed in detail. Especially, lipid membrane raft-like structure of some enveloped viruses is considered as a manifest example demonstrating the basic organization of raft-type membranes.

Functioning of many membrane proteins is regulated by cholesterol. Some proteins were shown to contain cholesterol-recognizing amino-acid consensus (CRAC) motif. In particular, influenza virus protein M1 bears these motifs. To study functional roles and action mechanisms of peptides containing cholesterol-recognizing amino-acid consensus (CRAC) motifs, we designed and synthesized peptide RTKLWEMLVELGNMDKAVKLWRKLKR (peptide P4), which includes two peptides corresponding to CRAC-containing α-helices 3 and 6 of influenza virus protein M1 (LEVLMEWLKTR, aa 39–49, and NNMDKAVKLYRKLK, aa 91–105, respectively). We show that peptide P4 in a concentration range from 0.5 to 50 μM dose-dependently modulates cholesterol-dependent interactions of cultured macrophages IC-21 with 2-micron latex particles mimicking bacteria. The effect of peptide P4 was stronger than the effects of the composing peptides studied previously and exhibited a biphasic dose–response relationship. At concentrations from 0.5 to 10 μM peptide P4 significantly increased the number of cell-associated particles; at concentrations 10–20 μM the number of cell-associated particles decreased, and at concentrations 20–50 μM peptide P4 suppressed the cell activity and cell adhesion and produced a toxic effect. Upon extraction of membrane cholesterol by means of methyl-β-cyclodextrin the inhibitory effects of peptide P4 developed at much lower concentrations. The biphasic dose-dependence of the peptide P4 effect and the influence of methyl-β-cyclodextrin can be explained by the ability of peptide P4 to interact with membrane cholesterol. We suggest that peptide P4 at low concentrations facilitates the formation of cholesterol-enriched domains in plasma membrane and thus stimulates aggregation of cell receptors responsible for interactions of macrophages with particles. At higher concentrations peptide P4 may interfere with the activity of cholesterol-dependent receptors due to competitive binding of cholesterol and thus suppress both cell–particle and cell–substrate interactions. We believe that peptide P4 may serve as a useful tool for studies of cholesterol-dependent processes in cells and may serve a basis for the design of new antimicrobial and immunomodulating substances.

This corrects the article DOI: 10.1134/S0006297918080096.

Entry of many viral and bacterial pathogens into host cells depends on cholesterol and/or cholesterol-enriched domains (lipid rafts) in the cell membrane. Earlier, we showed that influenza virus A matrix protein M1 contains amphipathic α-helices with exposed cholesterol-recognizing amino acid consensus (CRAC) motifs. In order to test possible functional activity of these motifs, we studied the effects of three synthetic peptides corresponding to the CRAC-containing α-helices of the viral M1 protein on the phagocytic activity of cultured mouse IC-21 macrophages. The following peptides were used: LEVLMEWLKTR (M1 α-helix 3, a.a. 39–49; further referred to as peptide 1), NNMDKAVKLYRKLK (M1 α-helix 6, a.a. 91–105; peptide 2), and GLKNDLLENLQAYQKR (M1 α-helix 13, a.a. 228–243; peptide 3). We found that all three peptides modulated interactions of IC-21 macrophages with non-opsonized 2-μm target particles. The greatest effect was demonstrated by peptide 2: in the presence of 35 μM peptide 2, the phagocytic index of IC-21 macrophages exceeded the control value by 60%; 10–11 mM methyl-β-cyclodextrin abolished this effect. Peptides 1 and 3 exerted weak inhibitory effect in a narrow concentration range of 5–10 μM. The dose-response curves could be approximated by a sum of two (stimulatory and inhibitory) components with different Hill coefficients, suggesting existence of at least two peptide-binding sites with different affinities on the cell surface. CD spectroscopy confirmed that the peptides exhibit structural flexibility in solutions. Altogether, our data indicate that amphipathic CRAC-containing peptides derived from the viral M1 protein modulate lipid raft-dependent processes in IC-21 macrophages.

Cyanobacteria are photoautotrophic bacteria that are known also as blue-green algae. They accumulate on different surfaces and objects and contribute to their biodegradation. Moreover, cyanobacteria produce toxins, which lead to harmful environmental and human health impacts. Hence, cyanobacterial growth control problem is very vital. The goal of the study was to obtain new nanocomplexes on the basis of a modern nanomaterial Taunit associated with antibiotic chloramphenicol and herbicide diuron and to test their antimicrobial effect against a model organism such as the unicellular cyanobacterium Synechocystis sp. PCC 6803. A nanomaterial made of multiwalled carbon nanotubes (MWCNTs) called Taunit was used for the first time to obtain nanocomplexes coupled either with herbicide diuron (DCMU (3-(3,4-dichlorophenyl)- 1,1-dimethylurea) or with antibiotic chloramphenicol. A small amount of Taunit (~1 mg) was needed to adsorb micrograms of diuron or chloramphenicol. The new formed nanocomplexes differentiate in their antimicrobial activity, which could be explained by the difference in their chemical mechanism of action. Taunit − diuron complex showed a higher biocide action against cyanobacterium than the Taunit − chloramphenicol complex. The results allow to discuss the prospects of research on the use of Taunit − diuron complex as a coating for various surfaces exposed to cyanobacteria fouling.

An optimized method for analysis of free amino acids using a modified lithium-citrate buffer system with a Hitachi L-8800 amino acid analyzer is described. It demonstrates clear advantages over the sodium-citrate buffer system commonly used for the analysis of protein hydrolysates. A sample pretreatment technique for amino acid analysis of brain extracts is also discussed. The focus has been placed on the possibility of quantitative determination of the reduced form of glutathione (GSH) with simultaneous analysis of all other amino acids in brain extracts. The method was validated and calibration coefficient (KGSH) was determined. Examples of chromatographic separation of free amino acids in extracts derived from different parts of the brain are presented.

A complex structural analysis of nuclear export protein NS2 (NEP) of influenza virus A has been performed using bioinformatics predictive methods and small-angle X-ray scattering data. The behavior of NEP molecules in a solution (their aggregation, oligomerization, and dissociation, depending on the buffer composition) has been investigated. It was shown that stable associates are formed even in a conventional aqueous salt solution at physiological рН value. For the first time we have managed to get NEP dimers in solution, to analyze their structure, and to compare the models obtained using the method of the molecular tectonics with the spatial protein structure predicted by us using the bioinformatics methods. The results of the study provide a new insight into the structural features of nuclear export protein NS2 (NEP) of the influenza virus A, which is very important for viral infection development.

Molecular mechanisms of long-term changes in brain metabolism after thiamine administration (single i.p. injection, 400 mg/kg) were investigated. Protocols for discrimination of the activities of the thiamine diphosphate (ThDP)-dependent 2-oxoglutarate and 2-oxoadipate dehydrogenases were developed to characterize specific regulation of the multienzyme complexes of the 2-oxoglutarate (OGDHC) and 2-oxoadipate (OADHC) dehydrogenases by thiamine. The thiamine-induced changes depended on the brain-region-specific expression of the ThDP-dependent dehydrogenases. In the cerebral cortex, the original levels of OGDHC and OADHC were relatively high and not increased by thiamine, whereas in the cerebellum thiamine upregulated the OGDHC and OADHC activities, whose original levels were relatively low. The effects of thiamine on each of the complexes were different and associated with metabolic rearrangements, which included (i) the brain-region-specific alterations of glutamine synthase and/or glutamate dehydrogenase and NADP(+)-dependent malic enzyme, (ii) the brain-region-specific changes of the amino acid profiles, and (iii) decreased levels of a number of amino acids in blood plasma. Along with the assays of enzymatic activities and average levels of amino acids in the blood and brain, the thiamine-induced metabolic rearrangements were assessed by analysis of correlations between the levels of amino acids. The set and parameters of the correlations were tissue-specific, and their responses to the thiamine treatment provided additional information on metabolic changes, compared to that gained from the average levels of amino acids. Taken together, the data suggest that thiamine decreases catabolism of amino acids by means of a complex and long-term regulation of metabolic flux through the tricarboxylic acid cycle, which includes coupled changes in activities of the ThDP-dependent dehydrogenases of 2-oxoglutarate and 2-oxoadipate and adjacent enzymes.

ABSTRACT Influenza virus is taken up from a pH-neutral extracellular milieu into an endosome, whose contents then acidify, causing changes in the viral matrix protein (M1) that coats the inner monolayer of the viral lipid envelope. At a pH of ∼6, M1 interacts with the viral ribonucleoprotein (RNP) in a putative priming stage; at this stage, the interactions of the M1 scaffold coating the lipid envelope are intact. The M1 coat disintegrates as acidification continues to a pH of ∼5 to clear a physical path for the viral genome to transit from the viral interior to the cytoplasm. Here we investigated the physicochemical mechanism of M1's pH-dependent disintegration. In neutral media, the adsorption of M1 protein on the lipid bilayer was electrostatic in nature and reversible. The energy of the interaction of M1 molecules with each other in M1 dimers was about 10 times as weak as that of the interaction of M1 molecules with the lipid bilayer. Acidification drives conformational changes in M1 molecules due to changes in the M1 charge, leading to alterations in their electrostatic interactions. Dropping the pH from 7.1 to 6.0 did not disturb the M1 layer; dropping it lower partially desorbed M1 because of increased repulsion between M1 monomers still stuck to the membrane. Lipid vesicles coated with M1 demonstrated pH-dependent rupture of the vesicle membrane, presumably because of the tension generated by this repulsive force. Thus, the disruption of the vesicles coincident with M1 protein scaffold disintegration at pH 5 likely stretches the lipid membrane to the point of rupture, promoting fusion pore widening for RNP release. IMPORTANCE Influenza remains a top killer of human beings throughout the world, in part because of the influenza virus's rapid binding to cells and its uptake into compartments hidden from the immune system. To attack the influenza virus during this time of hiding, we need to understand the physical forces that allow the internalized virus to infect the cell. In particular, we need to know how the protective coat of protein inside the viral surface reacts to the changes in acid that come soon after internalization. We found that acid makes the molecules of the protein coat push each other while they are still stuck to the virus, so that they would like to rip the membrane apart. This ripping force is known to promote membrane fusion, the process by which infection actually occurs.

A concentrate with the antimicrobial activity has been isolated from the culture broth of Streptomyces roseoflavus INA-Ac-5812. Its further fractionation by reversed-phase HPLC has resulted in six fractions. It has been established by MALDI-TOF and ESI-MS n precision mass-spectrometry methods that the main components of the complex antibiotic are several closely related compounds, presumably of a glycopeptide nature. The fraction containing an individual component with a mass of 1845.788 Da has been characterized by UV/Vis absorbance and fluorescence spectra, amino acid analysis, and derivatization with tris(2,6-dimethoxyphenyl)methyl cation. The activity of fractions against pathogenic microbes has been studied. The results allow the supposition that the INA-5812 antibiotic complex is a glyco- or lipoglycopeptide antibiotic of a new type, which is very promising for further study.

Nanocomplexes based on a modern Taunit nanosorbent with polyene antibiotics (amphotericin B, nystatin A1, and natamycin) widely used in medical practice were obtained for the first time; their antifungal activity was studied. It was demonstrated that the Taunit–nystatin A1 complex is active as compared to Aspergillus niger, while the Taunit–natamycin complex is active as compared to Aspergillus niger and Candida albicans. The Taunit–amphotericin B nanocomplex is not active relative to the studied test organisms (A. niger and C. albicans). Possible mechanisms of the action of the obtained complexes are discussed.

Complexes of widely clinically used polyene antibiotics (amphotericin B, nystatin Ai and natamycin) with a modern Taunit nanoadsorbent were obtained for the first time and their antifugal activities were studied. It was established that the Taunit-nystatin A1 complex possesses the antifugal activity against Aspergillus niger, whereas the Taunit-natamycin complex is active against Aspergillus niger and Candida albicans. The Taunit-amphoteri-cin B complex failed to exhibit the activity against these test organisms. Possible mechanisms of the obtained complexes functioning are discussed.