The feasibility of saturating aqueous anoxic solutions with in situ-generated high-purity nitric oxide (NO) is shown herein. A methemoglobin assay estimated the average nitric oxide concentration to be ca. 20 ± 3 µM. Graphene oxide aqueous dispersions were prepared by ultrasound-assisted extra exfoliation. These dispersions, including unpurified (pristine) samples and samples purified from transition metal impurities (bulk) fractions (bulkGO) and (nano) separated fractions (nanoGO) in a range of 0.5 to 14 kDa were prepared with ppm level concentrations. A robust and reproducible chemiluminescence (CL) assay validated the interaction between graphene oxide and NO in a luminol-based system. The results showed a significant increase in NO scavenging activity within the bulkGO fractions to nanofractions ranging from 14 to 3.5 kDa. The different reaction pathways underlying the transformation of nitric oxide are being evaluated, focusing on understanding how its presence or absence affects these processes. Our kinetic model suggests a significant difference in nitric oxide regulation; nanoGO demonstrates an interception rate seventy-times higher than that achieved through CL quenching.
Novel tripyrrolic photosensitizers covalently linked to drug molecules were obtained by post-macrocyclization functionalization of pyrazine-fused boron subporphyrazines with diclofenac and abiraterone. Improved cyclotrimerization conditions made it possible to obtain the starting boron subporphyrazines with axial chlorine in good yields. The influence of the nature of the axial ligand, as well as peripheral groups, on the photophysical properties of subporphyrazines is shown. The results of flash photolysis showed the formation of triplet states. Compared to diclofenac-substituted compounds, abiraterone-containing photosensitizers exhibited intense fluorescence (Phi(f) similar to 0.2) and high singlet oxygen quantum yields (Phi(Delta) similar to 0.6). In addition to bright fluorescence and efficient singlet oxygen generation, abiraterone-containing subporphyrazines demonstrated micromolar photodynamic activity in vitro and low dark cytotoxicity against a human colon cancer cell line (HCT116). Using thermal lens measurements, a significant increase in the thermal diffusivity of solutions of target subporphyrazines under the influence of laser irradiation was detected.
The variation of graphene oxide preparation techniques and the often occurring similarity of spectral information in molecular spectroscopy data for tested samples pose challenges for reliable data interpretation, especially when conservative "manual" analysis methods are used. This work employs a machine learning (ML)-based approach to develop an algorithm to solve cluster analysis issues of the infrared spectroscopy data for the graphene oxide: as-prepared, purified (by dialysis bag), and reduced samples. We propose an ML-based model to provide fully-automated qualitative analysis and a semi-automated pipeline for functional groups speciation analysis on graphene oxide, developed by simultaneously combining statistical analysis and data processing, optimization algorithms, and applying unsupervised learning techniques. Also, the study examines the possibilities of applying ML to analyze and cluster data from UV/vis and Dynamic Light Scattering (DLS).
The aim of this investigation is to determine the role of temperature in hydrocarbon generation in Bazhenov formation source rocks, as hydrothermal processes in situ are supposed to be the main contributor to kerogen transformation in Western Siberia. Laboratory modeling of organic matter isothermal transformation in powdered and extracted samples by hydrous pyrolysis at 300 °C, 325 °C, 350 °C, 375 °C, and 400 °C for 24 h was performed. Heated samples were analyzed via pyrolysis, and hydrocarbons were investigated by GC and GC-MS. Results show that more than 90% of the kerogen generation potential was utilized. The amounts of liquid and gaseous products reached 82 and 126 mg of hydrocarbon/g TOC, respectively. The volume of generated gas increased while the maximum production of liquid decreased with temperatures over 350 °C. The biomarker composition of liquid products at different temperatures was similar. The characteristics of kerogen and the product composition had a high correlation with the parameters for samples naturally formed in situ under an elevated heat flow. More subtle chemical analyses are required to determine the effects of kerogen’s chemical structure and the rock mineral composition on oil and gas generation.
This study experimentally confirms that averaging individual spectral transients (microscans) is not equivalent to averaging scans in the enhanced FT algorithm of data acquisition within the orbitrap performance. The effect of microscans on the absolute noise level is studied; signal-to-noise ratio (SNR) and results of qualitative molecular analysis of natural organic matter (NOM) were obtained. Our studies have shown significant differences in the structure of obtained spectra and especially in the intensity and appearance of noise signals. Increasing the number of microscans leads to an increase in SNR, which is especially important for systems with a large content of low-intensity analytical peaks like NOM. The influence is significant and must be considered both during in-laboratory measurements for various samples and when comparing results across different laboratories.
The thermal and optical properties of aqueous dispersions of magnetite nanoparticles were studied by dual-beam thermal-lens spectrometry. Surface-modified magnetite nanoparticles with an average crystal size of 7.5 nm were synthesized by a simple, one-stage method of coprecipitation followed by surface functionalization. For this purpose, the most popular and promising modifiers based on surfactants, polyelectrolytes, biopolymers and organic acids were used. The effect of the concentration of nanoparticles (in the range from 0.01 to 5 mg/L) and the nature of the surface modifier on the thermal diffusivity of the dispersion was studied. It was found that at concentrations of 0.4–0.6 mg/L, the dispersions exhibit heat-accumulating properties, which may be promising in the development of a magnetically controlled heat-conducting liquid. Thermal lens spectrometry in the steady-state measurement mode was used to reveal the processes of deposition and adsorption of magnetite nanoparticles on the surface of a quartz cell, leading to an apparent increase in thermal diffusivity by more than 30%. The paper touches upon the issues of accuracy and precision of temperature diffusion measurements, processing, and presentation of measurement results of time-resolved transient and steady-state signals for dispersed systems. The ratio of the change in the steady-state thermal-lens signals to the change in concentration regarding the concentration (dϑ/dc vs. c) provides a way to identify a systematic error at a low level (less than 5%) of thermal-lens measurements caused by a high concentration (or optical absorption) of the object. Various options for signal normalization (in terms of power, absorbance, and pure-solvent signal) are considered, and their advantages and disadvantages are discussed. An approach to using thermal diffusivity as a function of the steady-state signal of the sample is proposed. This approach allows for a comparative thermal-lens analysis of objects with different optical and thermal properties.
Thermal lens spectrometry is a high-sensitivity method for measuring the optical and thermal parameters of samples of different nature. To obtain both thermal diffusivity and absorbance-based signal measurements with high accuracy and precision, it is necessary to pay attention to the factors that influence the trueness of photothermal measurements. In this study, the features of liquid objects are studied, and the influence of optical and thermal effects accompanying photothermal phenomena are investigated. Thermal lens analysis of dispersed solutions and systems with photoinduced activity is associated with a large number of side effects, the impact of which on trueness is not always possible to determine. It is necessary to take into account the physicochemical properties and optical and morphological features of the nanophase and components exhibiting photoinduced activity. The results obtained make it possible to reduce systematic and random errors in determining the thermal-diffusivity-based and absorbance-based photothermal signals for liquid objects, and also contribute to a deeper understanding of the physicochemical processes in the sample.
High-resolution mass spectra of natural organic matter (NOM) contain a large number of noise signals. These signals interfere with the correct molecular composition estimation during nontargeted analysis because formula-assignment programs find empirical formulas for such peaks as well. Previously proposed noise filtering methods that utilize the profile of the intensity distribution of mass spectrum peaks rely on a histogram to calculate the intensity threshold value. However, the histogram profile can vary depending on the user settings. In addition, these algorithms are not automated, so they are handled manually. To overcome the mentioned drawbacks, we propose a new algorithm for noise filtering in mass spectra. This filter is based on Gaussian Mixture Models (GMMs), a machine learning method to find the intensity threshold value. The algorithm is completely data-driven and eliminates the need to work with a histogram. It has no customizable parameters and automatically determines the noise level for each individual mass spectrum. The algorithm performance was tested on mass spectra of natural organic matter obtained by averaging a different number of microscans (transients), and the results were compared with other noise filters proposed in the literature. Finally, the effect of this noise filtering approach on the fraction of peaks with assigned formulas was investigated. It was shown that there is always an increase in the identification rate, but the magnitude of the effect changes with the number of microscans averaged. The increase can be as high as 15%.
The work assessed the physicochemical changes in p-chlorophenoxy-substituted lutetium phthalocyanine in chloroform and tetrahydrofuran under the influence of laser radiation. For this purpose, thermal lens spectrometry was used, as combining optical molecular spectroscopy and thermophysical analysis. A significant change in the thermal diffusivity of the phthalocyanine was detected, which is probably a consequence of the specific solvation of phthalocyanine macromolecules at a level of 10 nmol/L. A change in the thermal lens signal over 12-16 h indicates photoinduced activity of the phthalocyanine.
Potentiometric titration in a fast and simultaneously high-resolution modality was proposed for the identification and quantification of protolytic groups of variable strength at the surface of primary soil particles. The method is implemented by titrimetric data processing as multicomponent spectra (pKa spectrotitrimetry). Due to the high resolution, the error of acidity-constant assessment (3–5%) is lower, compared to existing approaches; due to the fast titration, the effect of soil hydrolysis is minimized. The soil profiles for acidic Retisols (podzolic soils)—under a spruce crown and in the intercrown space—were studied. These soils, which have similar bulk properties and genesis but developed under different plant covers, were distinguished by pKa spectral features at 4–5; 5.5–6.5; 6.5–8.5; 7.5–8.5; and 9–10, as well as total group concentrations. Differences in acidic and basic-group distribution (carboxyl groups, amorphous aluminosilicates, carbonate species, amino groups, soluble (poly)phenolic compounds, phospholipids) and Al and Fe complex compounds within the same soil profiles and between two Retisols were found and quantified. The acidity constants and group concentrations found by pKa spectrotitrimetry were compared with conventional soil-composition indicators (total organic carbon, oxalate-soluble Fe and Al, and phosphorus), using principal component analysis. The main correlations are between the concentrations of oxalate-soluble Al and groups with pKa values of 5.0–6.5 and 8.5; oxalate-soluble Fe and pKa values of 9.0–10.0; and P2O5 and pKa values of 4.0–6.0 and 6.5–8.5. The method provides a set of major acidity values without a priori information on a soil sample and can be used for screening and identifying similar soils.
Redox metabolism is an integral part of the glutathione system, encompassing reduced and oxidized glutathione, hydrogen peroxide, and associated enzymes. This core process orchestrates a network of thiol antioxidants like thioredoxins and peroxiredoxins, alongside critical thiol-containing proteins such as mercaptoalbumin. Modifications to thiol-containing proteins, including oxidation and glutathionylation, regulate cellular signaling influencing gene activities in inflammation and carcinogenesis. Analyzing thiol antioxidants, especially glutathione, in biological fluids offers insights into pathological conditions. This review discusses the analytical methods for biothiol determination, mainly in blood plasma. The study includes all key methodological aspects of spectroscopy, chromatography, electrochemistry, and mass spectrometry, highlighting their principles, benefits, limitations, and recent advancements that were not included in previously published reviews. Sample preparation and factors affecting thiol antioxidant measurements are discussed. The review reveals that the choice of analytical procedures should be based on the specific requirements of the research. Spectrophotometric methods are simple and cost-effective but may need more specificity. Chromatographic techniques have excellent separation capabilities but require longer analysis times. Electrochemical methods enable real-time monitoring but have disadvantages such as interference. Mass spectrometry-based approaches have high sensitivity and selectivity but require sophisticated instrumentation. Combining multiple techniques can provide comprehensive information on thiol antioxidant levels in biological fluids, enabling clearer insights into their roles in health and disease. This review covers the time span from 2010 to mid-2024, and the data were obtained from the SciFinder® (ACS), Google Scholar (Google), PubMed®, and ScienceDirect (Scopus) databases through a combination search approach using keywords.
Context/Purpose: To get reliable information on soil organic matter, its separation or fractionation is required. Membrane fractionation is applicable to particles from 10 Da to several hundred micrometers in size. The focus of the study was on typical-chernozem narrow fractions of water-extractable organic matter (WEOM) from a cascade of membrane filters. Methods: Micro-/ultrafiltration through polycarbonate and PET track-etched membranes with pore sizes of 0.01–10 µm at room temperature was used. Results/Interpretation: Narrow WEOM fractions differ significantly in both organic and mineral constituents. For macro- and microelements, Al, Fe, and Ti are primarily observed in the fractions above 0.2 µm; Ba, Mn, Si, Zn, Ca, K, S, and Mg, in < 0.2 µm. By FTIR and ICP–AES, all narrow fractions contain clay minerals of variable composition. All fractions contain intensely fluorescing humic- and tyrosine-like components with variable composition. Conclusion: Thus, WEOM of different compositions is absorbed by clay minerals of different compositions. The developed approach provides preparative isolation of WEOM fractions and expands knowledge on WEOM chemical composition and its relationship with mineral phases.
A fast method for preparing aqueous graphene oxide (GO) dispersions by electrochemical oxidation of a graphite anode without preliminary intercalation with oxidizing agents is proposed. Ultrasonic probing was used in the modulation mode of ultrasonic waves (work/rest) for more efficient graphite oxidation–exfoliation. It is shown that the 4/2 s mode of ultrasonic modulation is the most effective due to the probe material’s low corrosion while maintaining the optimum synthesis temperature not exceeding 30–35 °C and achieving the best characteristics of the resulting product. Three cases of anodic oxidation of graphite to obtain graphene oxide were considered: (1) a combined cathode–anode compartment, (2) a split cathode–anode salt-bridged compartment, and (3) separated anode compartment with a 3.5 kDa dialysis membrane. It was determined that the approach to synthesis with a divided cathode–anode compartment makes it possible to obtain GO sheets with fewer defects compared to chemical methods or methods with a combined cathode–anode compartment and makes it possible to control the oxidation degree of the material (C:O ratio) by varying the current density. The prepared samples showed good stability for more than six months. The spectral and morphological characteristics were studied. Using chemiluminometry in the luminol/Co(II)/H2O2 system, the antioxidant properties concerning three key reactive oxygen species (H2O2, superoxide anion radical, and hydroxyl radical) were demonstrated. It was also shown that the prepared GO dispersions do not induce lipid and phospholipid peroxidation.
Excitation–emission matrix (EEM) fluorescence spectroscopy of unmodified (pristine) fullerenes C60 and C70 in benzene, toluene, and n-hexane at room temperature was used for their quantification by their solvent-dependent EEM bands specific to each fullerene. The intensity and parameters of fluorescence depend on both the fullerene and solvent and provide the conditions for the quantification of both fullerenes in their mixtures without separation. The detection limits for C60 in n-hexane and C70 in benzene under the selected conditions are 7 and 2 nmol/L, respectively. The approach was tested for model and real mixtures of fullerenes C60 and C70.
The existing techniques for lignosulfonate (LS) in humate fertilizers lack selectivity to humic substances (HS) as the main component; they involve labor- and time-consuming sample preparation to separate the components at the level of detectable LS concentrations. The procedure based on attenuated total reflectance (ATR) FTIR spectroscopy with simple sample preparation for directly quantifying lignosulfonates in aqueous solutions and lignosulfonates and HS in aqueous solutions of preparations based on HS of coal origin (Sigma Aldrich, Powhumus, and Life Force) was developed. Lignosulfonate quantification is possible by exploiting the bands at 1266, 1192, 1093, and 1042 cm−1 with limits of detection of 0.4–2 g/L. Quantifying LS in a mixture with humates includes centrifugation of prepared solutions to separate interfering silicate impurities. LS quantification in the range of 10–100 g/L against HS (up to a 2-fold excess) with an error of up to 5% is possible based on the spectral absorptions at 1093 and 1042 cm−1. Simultaneous quantification of humate in the mixture with an error of up to 10% is possible by exploiting the bands at 1570 and 1383 cm−1 (carboxylates). The study shows the possibility of determining lignosulfonate against an HS background several times higher than lignosulfonate. The developed technique is applicable for analyzing fertilizers of simple composition and quality control of pure humates used for plant growth. Obtaining the most accurate results needs calibration solutions from the same brands that make up the test mixture.
Fullerenes and metallofullerenes play an active role in homeostasis of reactive oxygen species and may cause oxidative damage to cells. As pristine fullerenes are a basis for derivatization, studying oxidative DNA damage/repair and apoptosis is important in terms of genotoxicity and cytotoxicity for their biomedical application. Aqueous dispersions of C60, C70, and Gd@C82 (5 nM and 1.5 μM) were cultured with human fetal lung fibroblasts for 1, 3, 24, and 72 h. Oxidative DNA damage/repair was assessed through concentration of 8-oxodG, double-strand breaks, and activation of BRCA1. Activity of apoptosis was assessed through the BCL2/BAX ratio. All three fullerenes caused oxidative modification of DNA at the early stages; C60 caused the most long-term damage, Gd@C82 caused the most short-term damage, and C70 caused "wave-like" dynamics. The dynamics of DNA repair correlated with the dynamics of oxidative damage, but Gd@C82 caused more prolonged activation of the repair system than C60 or C70. The oxidative toxicity of Gd@C82, is minor and the oxidative toxicity of C60 is mild and short-term, in contrast to C70. In relation to the studied effects, the fullerenes can be arranged in a safety row of Gd@C82 > C60 > C70.
Membrane fractionation with track-etched membranes was used to size-profile the microelement composition of water-extractable soil colloids (WESCs). The aim of the study is the element composition of narrow WESC fractions of typical chernozems in the range of 0.01–10 µm. Micro-/ultrafiltration through a cascade of track-etched polycarbonate membrane filters with pore sizes of 5, 2, 1, 0.8, 0.4, 0.2, 0.1, 0.05, 0.03, and 0.01 µm at room temperature was used. ICP–AES using direct spraying of obtained fractions without decomposition was used; Al, Ba, Cd, Cr, Cu, Fe, Mn, Si, Sr, Ti, Zn, Ca, K, Mg, Na, P, and S were found. Narrow WESC fractions differ significantly. For macro- and microelements, maximum amounts of Si, Al, Fe, and Ti and their maximum percentages are observed in fractions with sizes above 1 µm, while Ca, Mg, Mn, Cu, Zn, K, and S are accumulated more in fractions with sizes below 1 µm. The developed approach provides preparative isolation of a detailed set of narrow WESC fractions in the micrometer–nanometer range. This provides element soil profiles that reveal distinct differences and the individual character of each fraction as well as trends in changes in the mineral matrix and microelement composition with fraction size.
Fourier-transform infrared (FTIR) spectroscopy provides rapid, reliable, quantitative, and qualitative analysis of samples in different aggregation states, i.e., gases, thin films, solids, liquids, etc. However, when analyzing aqueous solutions, particular issues associated with the rather pronounced IR absorption characteristics of water appear to interfere with the solute determination. In this review, Fourier-transform infrared spectroscopic techniques and their analytical capabilities for analyzing aqueous solutions are reviewed, and highlight examples are discussed.
The interaction of inorganic nanomaterials with biological fluids containing proteins can lead not only to the formation of a protein corona and thereby to a change in the biological activity of nanoparticles but also to a significant effect on the structural and functional properties of the biomolecules themselves. This work studied the interaction of nanoscale CeO2, the most versatile nanozyme, with human serum albumin (HSA). Fourier transform infrared spectroscopy, MALDI-TOF mass spectrometry, UV-vis spectroscopy, and fluorescence spectroscopy confirmed the formation of HSA-CeO2 nanoparticle conjugates. Changes in protein conformation, which depend on the concentration of both citrate-stabilized CeO2 nanoparticles and pristine CeO2 nanoparticles, did not affect albumin drug-binding sites and, accordingly, did not impair the HSA transport function. The results obtained shed light on the biological consequences of the CeO2 nanoparticles' entrance into the body, which should be taken into account when engineering nanobiomaterials to increase their efficiency and reduce the side effects.
Granulometric aggregate fractions (20 µm–2 mm) of chernozem soils with different agriculture-use histories (native steppe, permanent bare fallow, arable land, and shelterbelt) were investigated in mid-IR and far IR regions (4000–100 cm−1) by heating in the air from 25 to 215 °C, using ATR FTIR and linear discriminant analysis to differentiate the land-use samples without chemical perturbation. The temperature dependences of the band maxima significantly differed for bands of silicate matrix and bands with the contribution of soil organic matter and were more stable to experimental conditions compared to the absolute positions. The thermal behavior of the integral intensities of the IR bands at 790–750 cm−1 and 440–420 cm−1 that was different compared to pure quartz, may be attributed to –C–H bending of alkanes and (poly)aromatic structures and skeletal bending, and could be used to distinguish intact soils from agriculturally used samples. The different temperature behaviors of the bands for fractions of soils with different land use are shown, with the maximum difference in fractions below 20–50 µm and medium fractions (50–200 µm). Changes in the band-maximum frequencies and the integral intensities of the bands were reversible for a heating–cooling cycle. The linear discriminant analysis of the spectra obtained for granulometric fractions of chernozem soils made it possible to separate the samples of native steppe, arable land, bare fallow, and shelterbelt with a high probability based on the type of vegetation and agrogenic load, mainly on the basis of the spectral ranges associated with biogenic forms of quartz and phytoliths.