Europa is a premier target for advancing both planetary science and astrobiology, as well as for opening a new window into the burgeoning field of comparative oceanography. The potentially habitable subsurface ocean of Europa may harbor life, and the globally young and comparatively thin ice shell of Europa may contain biosignatures that are readily accessible to a surface lander. Europa's icy shell also offers the opportunity to study tectonics and geologic cycles across a range of mechanisms and compositions. Here we detail the goals and mission architecture of the Europa Lander mission concept, as developed from 2015 through 2020. The science was developed by the 2016 Europa Lander Science Definition Team (SDT), and the mission architecture was developed by the preproject engineering team, in close collaboration with the SDT. In 2017 and 2018, the mission concept passed its mission concept review and delta-mission concept review, respectively. Since that time, the preproject has been advancing the technologies, and developing the hardware and software, needed to retire risks associated with technology, science, cost, and schedule.

The biodiversity, ecosystem services and climate variability of the Antarctic continent and the Southern Ocean are major components of the whole Earth system. Antarctic ecosystems are driven more strongly by the physical environment than many other marine and terrestrial ecosystems. As a consequence, to understand ecological functioning, cross-disciplinary studies are especially important in Antarctic research. The conceptual study presented here is based on a workshop initiated by the Research Programme Antarctic Thresholds - Ecosystem Resilience and Adaptation of the Scientific Committee on Antarctic Research, which focussed on challenges in identifying and applying cross-disciplinary approaches in the Antarctic. Novel ideas and first steps in their implementation were clustered into eight themes. These ranged from scale problems, through risk maps, and organism/ecosystem responses to multiple environmental changes and evolutionary processes. Scaling models and data across different spatial and temporal scales were identified as an overarching challenge. Approaches to bridge gaps in Antarctic research programmes included multi-disciplinary monitoring, linking biomolecular findings and simulated physical environments, as well as integrative ecological modelling. The results of advanced cross-disciplinary approaches can contribute significantly to our knowledge of Antarctic and global ecosystem functioning, the consequences of climate change, and to global assessments that ultimately benefit humankind.

ABSTRACT Snow algae can form large-scale blooms across the snowpack surface and near-surface environments. These pigmented blooms can decrease snow albedo and increase local melt rates, and they may impact the global heat budget and water cycle. Yet, the underlying causes for the geospatial occurrence of these blooms remain unconstrained. One possible factor contributing to snow algal blooms is the presence of mineral dust as a micronutrient source. We investigated the bioavailability of iron (Fe)-bearing minerals, including forsterite (Fo 90 , Mg 1.8 Fe 0.2 SiO 4 ), goethite, smectite, and pyrite as Fe sources for a Chloromonas brevispina -bacterial coculture through laboratory-based experimentation. Fo 90 was capable of stimulating snow algal growth and increased the algal growth rate in otherwise Fe-depleted cocultures. Fo 90 -bearing systems also exhibited a decrease in the ratio of bacteria to algae compared to those of Fe-depleted conditions, suggesting a shift in microbial community structure. The C. brevispina coculture also increased the rate of Fo 90 dissolution relative to that of an abiotic control. Analysis of 16S rRNA genes in the coculture identified Gammaproteobacteria , Betaproteobacteria , and Sphingobacteria , all of which are commonly found in snow and ice environments. Archaea were not detected. Collimonas and Pseudomonas , which are known to enhance mineral weathering rates, comprised two of the top eight (>1%) operational taxonomic units (OTUs). These data provide unequivocal evidence that mineral dust can support elevated snow algal growth under otherwise Fe-depleted growth conditions and that snow algal microbial communities can enhance mineral dissolution under these conditions. IMPORTANCE Fe, a key micronutrient for photosynthetic growth, is necessary to support the formation of high-density snow algal blooms. The laboratory experiments described herein allow for a systematic investigation of the interactions of snow algae, bacteria, and minerals and their ability to mobilize and uptake mineral-bound Fe. Results provide unequivocal and comprehensive evidence that mineral-bound Fe in Fe-bearing Fo 90 was bioavailable to Chloromonas brevispina snow algae within an algal-bacterial coculture. This evidence includes (i) an observed increase in snow algal density and growth rate, (ii) decreased ratios of bacteria to algae in Fo 90 -containing cultures relative to those of cultures grown under similarly Fe-depleted conditions with no mineral-bound Fe present, and (iii) increased Fo 90 dissolution rates in the presence of algal-bacterial cocultures relative to those of abiotic mineral controls. These results have important implications for the role of mineral dust in supplying micronutrients to the snow microbiome, which may help support dense snow algal blooms capable of lowering snow albedo and increasing snow melt rates on regional, and possibly global, scales.

AND IMPLICATIONS FOR MINERAL BIOSIGNATURE FORMATION. Z. R. Harrold, E. M. Hausrath, A. E. Murray, O. Tschauner, A. H. Garcia, A. Lanzirotti, M. A. Marcus, M. Newville, C. L. Bartlett and J. Raymond, Department of Geoscience, UNLV, 4505 S. Maryland Parkway, Las Vegas, NV 89154-4010 Elisabeth.Hausrath@unlv.edu, Desert Research Institute 2215 Raggio Parkway Reno, NV 89512, University of Nevada, Las Vegas, School of Life Sciences, 4505 S. Maryland Pkwy., Las Vegas, NV 89154, Center for Advanced Radiation Sources, The University of Chicago, Chicago, IL, USA, Lawrence Berkeley National Lab, Advanced Light Source, Berkeley, CA, USA

Lake Vida, in the Victoria Valley of East Antarctica, is frozen, yet harbors liquid brine (~20% salt, >6 times seawater) intercalated in the ice below 16 m. The brine has been isolated from the surface for several thousand years. The brine conditions (permanently dark, -13.4 °C, lack of O2 , and pH of 6.2) and geochemistry are highly unusual. For example, nitrous oxide (N2 O) is present at a concentration among the highest reported for an aquatic environment. Only a minor 17 O anomaly was observed in N2 O, indicating that this gas was predominantly formed in the lake. In contrast, the 17 O anomaly in nitrate (NO3-) in Lake Vida brine indicates that approximately half or more of the NO3- present is derived from atmospheric deposition. Lake Vida brine was incubated in the presence of 15 N-enriched substrates for 40 days. We did not detect microbial nitrification, dissimilatory reduction of NO3- to ammonium (NH4+), anaerobic ammonium oxidation, or denitrification of N2 O under the conditions tested. In the presence of 15 N-enriched nitrite (NO2-), both N2 and N2 O exhibited substantial 15 N enrichments; however, isotopic enrichment declined with time, which is unexpected. Additions of 15 N-NO2- alone and in the presence of HgCl2 and ZnCl2 to aged brine at -13 °C resulted in linear increases in the δ15 N of N2 O with time. As HgCl2 and ZnCl2 are effective biocides, we interpret N2 O production in the aged brine to be the result of chemodenitrification. With this understanding, we interpret our results from the field incubations as the result of chemodenitrification stimulated by the addition of 15 N-enriched NO2- and ZnCl2 and determined rates of N2 O and N2 production of 4.11-41.18 and 0.55-1.75 nmol L-1  day-1 , respectively. If these rates are representative of natural production, the current concentration of N2 O in Lake Vida could have been reached between 6 and 465 years. Thus, chemodenitrification alone is sufficient to explain the high levels of N2 O present in Lake Vida.

The permafrost on the North Slope of Alaska is densely populated by shallow lakes that result from thermokarst erosion. These lakes release methane (CH4 ) derived from a combination of ancient thermogenic pools and contemporary biogenic production. Despite the potential importance of CH4 as a greenhouse gas, the contribution of biogenic CH4 production in arctic thermokarst lakes in Alaska is not currently well understood. To further advance our knowledge of CH4 dynamics in these lakes, we focused our study on (i) the potential for microbial CH4 production in lake sediments, (ii) the role of sediment geochemistry in controlling biogenic CH4 production, and (iii) the temperature dependence of this process. Sediment cores were collected from one site in Siqlukaq Lake and two sites in Sukok Lake in late October to early November. Analyses of pore water geochemistry, sedimentary organic matter and lipid biomarkers, stable carbon isotopes, results from CH4 production experiments, and copy number of a methanogenic pathway-specific gene (mcrA) indicated the existence of different sources of CH4 in each of the lakes chosen for the study. Analysis of this integrated data set revealed that there is biological CH4 production in Siqlukaq at moderate levels, while the very low levels of CH4 detected in Sukok had a mixed origin, with little to no biological CH4 production. Furthermore, methanogenic archaea exhibited temperature-dependent use of in situ substrates for methanogenesis, and the amount of CH4 produced was directly related to the amount of labile organic matter in the sediments. This study constitutes an important first step in better understanding the actual contribution of biogenic CH4 from thermokarst lakes on the coastal plain of Alaska to the current CH4 budgets.

Lake Vida, located in Victoria Valley, is one of the largest lakes in the McMurdo dry valleys and is known to contain hypersaline liquid brine sealed below 16 m of freshwater ice. For the first time, Lake Vida was drilled to a depth of 27 m. Below 21 m the ice is marked by well-sorted sand layers up to 20 cm thick within a matrix of salty ice. From ice chemistry, isotopic composition of δ18O and δ2H, and ground penetrating radar profiles, we conclude that the entire 27 m of ice formed from surface runoff and the sediment layers represent the accumulation of surface deposits. Radiocarbon and optically stimulated luminescence dating limit the maximum age of the lower ice to 6300 14C yr BP. As the ice cover ablated downwards during periods of low surface inflow, progressive accumulation of sediment layers insulated and preserved the ice and brine beneath, analogous to the processes that preserve shallow ground ice. The repetition of these sediment layers reveals hydrologic variability in Victoria Valley during the mid- to late Holocene. Lake Vida is an exemplar site for understanding the preservation of subsurface brine, ice, and sediment in a cold desert environment.

Abstract. Lake Vida, located in Victoria Valley, is one of the largest lakes in the McMurdo Dry Valleys. Unlike other lakes in the region, the surface ice extends at least 27 m, which has created an extreme and unique habitat by isolating a liquid-brine with salinity of 195 g L−1. Below 21 m, the ice is marked by well-sorted sand layers up to 20 cm thick, within a matrix of salty ice. From ice chemistry, isotopic abundances of 18O and 2H, ground penetrating radar profiles, and mineralogy, we conclude that the entire 27 m of ice formed from surface runoff, and the sediment layers represent the accumulation of fluvial and aeolian deposits. Radiocarbon and optically stimulated luminescence dating limit the maximum age of the lower ice to 6300 14C yr BP. As the ice cover ablated downwards during periods of low surface inflow, progressive accumulation of sediment layers insulated and preserved the ice and brine beneath; analogous to the processes that preserve shallow ground ice. The repetition of these sediment layers reveals climatic variability in Victoria Valley during the mid- to late Holocene. Lake Vida is an excellent Mars analog for understanding the preservation of subsurface brine, ice and sediment in a cold desert environment.

Perennial ice covers on many Antarctic lakes have resulted in high lake inorganic carbon contents. The objective of this paper was to evaluate and compare the brine and CO2 chemistries of Lake Vida (Victoria Valley) and West Lake Bonney (Taylor Valley), two lakes of the McMurdo Dry Valleys (East Antarctica), and their potential consequences during global warming. An existing geochemical model (FREZCHEM-15) was used to convert measured molarity into molality needed for the FREZCHEM model, and this model added a new algorithm that converts measured DIC into carbonate alkalinity needed for the FREZCHEM model. While quite extensive geochemical information exists for ice-covered Taylor Valley lakes, such as West Lake Bonney, only limited information exists for the recently sampled brine of >25 m ice-thick Lake Vida. Lake Vida brine had a model-calculated pCO2 = 0.60 bars at the field pH (6.20); West Lake Bonney had a model-calculated pCO2 = 5.23 bars at the field pH (5.46). Despite the high degree of atmospheric CO2 supersaturation in West Lake Bonney, it remains significantly undersaturated with the gas hydrate, CO2·6H2O, unless these gas hydrates are deep in the sediment layer or are metastable having formed under colder temperatures or greater pressures. Because of lower temperatures, Lake Vida could start forming CO2·6H2O at lower pCO2 values than West Lake Bonney; but both lakes are significantly undersaturated with the gas hydrate, CO2·6H2O. For both lakes, simulation of global warming from current subzero temperatures (−13.4 °C in Lake Vida and −4.7 °C in West Lake Bonney) to 10 °C has shown that a major loss of solution-phase carbon as CO2 gases and carbonate minerals occurred when the temperatures rose above 0 °C and perennial ice covers would disappear. How important these Antarctic CO2 sources will be for future global warming remains to be seen. But a recent paper has shown that methane increased in atmospheric concentration due to deglaciation about 10,000 years ago. So, CO2 release from ice lakes might contribute to atmospheric gases in the future.

Changing environments and resource demands present challenges to Antarctic conservation.

Marine bacterioplankton studies over the annual cycle in polar systems are limited due to logistic constraints in site access and support. Here, we conducted a comparative study of marine bacterioplankton sampled at several time points over the annual cycle (12 occasions each) at sub-Antarctic Kerguelen Islands (KI) and Antarctic Peninsula (AP) coastal sites in order to establish a better understanding of the extent and nature of variation in diversity and community structure at these different latitudes (49-64S). Molecular methods targeting the 16S rRNA gene (DGGE, CE-SSCP and tag pyrosequencing) suggest a strong seasonal pattern with higher richness in winter and a clear influence of phytoplankton bloom events on bacterioplankton community structure and diversity in both locations. The distribution of sequence tags within Gammaproteobacteria, Alphaproteobacteria and Bacteriodetes differed between the two regions. At both sites, several abundant Rhodobacteraceae, uncultivated Gammaproteobacteria and Bacteriodetes-associated tags displayed intense seasonal variation often with similar trends at both sites. This enhanced understanding of variability in dominant groups of bacterioplankton over the annual cycle contributes to an expanding baseline to understand climate change impacts in the coastal zone of polar oceans and provides a foundation for comparison with open ocean polar systems.

Enrichment of the pelagic ecosystem associated with the proliferation of free-drifting icebergs prompts questions about increased productivity and the export flux of organic carbon to the deep ocean with continued climate warming. Lagrangian Sediment Traps (LST) were deployed autonomously beneath a large tabular, free-drifting iceberg (C-18a) in the NW Weddell Sea during March and April 2009 to collect sinking particles at a depth of 600m. Three LST deployments associated with C-18a, within a 30-km radius, collected sinking diatom frustules, dominated by Corethron pennatum and Fragilariopsis nana, euphausiid fragments, crustacean and fish fecal material, detrital aggregates and mineral grains. One LST deployment at a “control” site 74km away in open water devoid of icebergs collected diatom frustules, euphausiid molts, crustacean fecal material and detrital aggregates. Phytoplankton abundance, microbial abundance and biomass were significantly higher in the LST samples than in open-water collections at 500m depth. The mean mass flux and organic carbon flux associated with iceberg C-18a were twice as high, 124mgm−2d−1 and 5.6mg Corgm−2d−1, respectively, than at the control site. A similar trend was observed in Corg/234Th activity, being highest near C-18a and lowest at the control site. Extrapolation of the area of enrichment to 30km radius around C-18a, 2826km2, produces an estimated mass flux of 350tonsd−1 and carbon flux of 15.8tonsCorgd−1. Five similar sized icebergs to C-18a were identified in satellite images in a surrounding 47,636km2 area at the same time of sampling. Assuming a 30-km radius as the area of influence around each of these five icebergs, 46% of the total area would be enhanced with an export flux at 600m of 122.4tonsCorgd−1. The large numbers of smaller icebergs identified visually in this area would only increase this area of influence. Icebergs serve as areas of local enrichment and with increased proliferation, must be considered in the cycling of carbon in the Southern Ocean.

DNA matching is a crucial step in sequence alignment. Since sequence alignment is an approximate matching process there is a need for good approximate algorithms. The process of matching in sequence alignment is generally finding longest common subsequences. However, finding a longest common subsequence may not be the best solution for either a database match or an assembly. An optimal alignment of subsequences is based on several factors, such as quality of bases, length of overlap, etc. Factors such as quality indicate if the data is an actual read or an experimental error. Fuzzy logic allows tolerance of inexactness or errors in sub sequence matching. We propose fuzzy logic for approximate matching of subsequences. Fuzzy characteristic functions are derived for parameters that influence a match. We develop a prototype for a fuzzy assembler. The assembler is designed to work with low quality data which is generally rejected by most of the existing techniques. We test the assembler on sequences from two genome projects namely, Drosophila melanogaster and Arabidopsis thaliana. The results are compared with other assemblers. The fuzzy assembler successfully assembled sequences and performed similar and in some cases better than existing techniques

ABSTRACT Six environmental fosmid clones from Antarctic coastal water bacterioplankton were completely sequenced. The genome fragments harbored small-subunit rRNA genes that were between 85 and 91% similar to those of their nearest cultivated relatives. The six fragments span four phyla, including the Gemmatimonadetes, Proteobacteria (α and γ), Bacteroidetes, and high-G+C gram-positive bacteria. Gene-finding and annotation analyses identified 244 total open reading frames. Amino acid comparisons of 123 and 113 Antarctic bacterial amino acid sequences to mesophilic homologs from G+C-specific and SwissProt/UniProt databases, respectively, revealed widespread adaptation to the cold. The most significant changes in these Antarctic bacterial protein sequences included a reduction in salt-bridge-forming residues such as arginine, glutamic acid, and aspartic acid, reduced proline contents, and a reduction in stabilizing hydrophobic clusters. Stretches of disordered amino acids were significantly longer in the Antarctic sequences than in the mesophilic sequences. These characteristics were not specific to any one phylum, COG role category, or G+C content and imply that underlying genotypic and biochemical adaptations to the cold are inherent to life in the permanently subzero Antarctic waters.

Rock, soil, and ice penetration by coring, drilling or abrading is of great importance to a large number of space and earth applications. Proven techniques to sample Mars subsurface will be critical for future NASA astrobiology missions that will search for records of past and present life on the planet. An Ultrasonic/Sonic Drill/Corer (USDC) has been developed as an adaptable tool for many of these applications [Bar-Cohen et al., 2001]. The USDC uses a novel drive mechanism to transform the ultrasonic or sonic vibrations of the tip of a horn into a sonic hammering of a drill bit through an intermediate free-flying mass. The USDC design was modified to fabricate an Ultrasonic/Sonic Ice Gopher that is designed to core down to meters depth for in situ analysis and sample collection. This technology was demonstrated at Lake Vida in the Dry Valleys, Antarctica. Coring ice at -20°C as in Lake Vida has been a challenge and efforts were made to develop the required ice core cutting, ice chip handling and potential ice melting (and refreezing) during drilling. The analysis and fabrication challenges and testing results are presented in this paper.

There is growing evidence for ice and fluids near the surface of Mars with potential discharge of brines, which may preserve a record of past life on the planet. Proven techniques to sample Mars subsurface will be critical for future NASA astrobiology missions that will search for such records. The required technology studies are underway in the McMurdo Dry valleys, Antarctica, which is serving as a Mars analog. The ice layer on Lake Vida in the dry valleys is estimated to be 20-meter thick where below 16-m depth there is a mix of ice and brine, which has never been sampled directly due to logistical constraints. A novel light weight, low power ultrasonic/sonic driller/corer (USDC) mechanism was developed that overcomes the need for high axial loads required by drilling via conventional techniques. The USDC was modified to produce an Ultrasonic/Sonic Gopher that is being developed to core down to the 20-m depth for in situ analysis and sample collection. Coring ice at -20°C as in Lake Vida suggests that it is a greater challenge and current efforts are focused on the problems of ice core cutting, ice chip handling and potential ice melt (and refreezing) during drilling. An analytical model and a prototype are being developed with an effort to optimize the design while addressing the thermal issues, drilling rate, power, mass and the electromechanical behavior.