Flow cells are ubiquitous in laboratories and automated instrumentation, and are crucial for ease of sample preparation, analyte addition and buffer exchange. The assumption that the fluids have exchanged completely in a flow cell is often critical to data interpretation. This article describes the buoyancy effects on the exchange of fluids with differing densities or viscosities in thin, circular flow cells. Depending on the flow direction, fluid exchange varies from highly efficient to drastically incomplete, even after a large excess of exchange volume. Numerical solutions to the Navier-Stokes and Cahn-Hilliard equations match well with experimental observations. This leads to quantitative predictions of the conditions where buoyancy forces in thin flow cells are significant. A novel method is introduced for exchanging fluid cells by accounting for and utilizing buoyancy effects that can be essential to obtain accurate results from measurements performed within closed-volume fluid environments.
Among Professor Russell's numerous, original, and significant contributions to polymer science are those in which he helped pioneer the application of neutron reflectometry to the study of thin film systems. For this groundbreaking work, along with his support of neutron scattering methods in general, he was awarded the 2020 Clifford G. Shull Prize by the Neutron Scattering Society of America, named after and in honor of the Nobel Prize laureate. This article highlights some of the first applications of neutron reflectometry to probe the nanoscale structure of polymer thin film systems that Professor Russell and his colleagues pioneered. A concise account of the subsequent evolution of even more powerful phase-sensitive reflectometry techniques, following the success of their early work, is then presented. In addition to a general description of this current methodology, several particularly relevant and illustrative examples are given.
In the analysis of neutron scattering measurements of condensed matter structure, it normally suffices to treat the incident and scattered neutron beams as if composed of incoherent distributions of plane waves with wavevectors of different magnitudes and directions that are taken to define an instrumental resolution. However, despite the wide-ranging applicability of this conventional treatment, there are cases, such as specular neutron reflectometry, in which the structural length scales of the scattering object require that the wavefunction of an individual neutron in the beam be described by a spatially localized packet - in particular with respect to the transverse extent of its wavefronts (i.e. normal to the packet's mean direction of propagation). It is shown in the present work that neutron diffraction patterns observed for periodic transmission phase gratings, as well as specular reflection measurements from patterned thin films with repeat units of the order of micrometres, can be accurately described by associating an individual neutron with a wave packet and treating a beam as a collection of independent packets. In these cases, accurate analysis requires that the transverse spatial extent of a neutron packet wavefront be accounted for in addition to the angular divergence of the beam that is characterized by a distribution of packet mean wavevector directions. It is shown how a measure of the effective transverse spatial extent of the neutron packet - over which its wavefronts are of sufficient uniformity to produce coherent scattering - can be determined by employing reference diffraction gratings and patterned thin films of known structure and composition.
Liquid cells are an increasingly common sample environment for neutron reflectometry experiments and are critical for measuring the properties of materials at solid/liquid interfaces. Background scattering determines the maximum useful scattering vector, and hence the spatial resolution, of the neutron reflectometry measurement. The primary sources of background are the liquid in the cell reservoir and the materials forming the liquid cell itself. Thus, characterization and mitigation of these background sources are necessary for improvements in the signal-to-background ratio and resolution of neutron reflectometry measurements employing liquid cells. Single-crystal silicon is a common material used for liquid cells due to its low incoherent scattering cross section for neutrons, and the path lengths of the neutron beam through silicon can be several centimetres in modern cell designs. Here, a liquid cell is constructed with a sub-50 µm thick liquid reservoir encased in single-crystal silicon. It is shown that, at high scattering vectors, inelastic scattering from silicon represents a significant portion of the scattering background and is, moreover, structured, confounding efforts to correct for it by established background subtraction techniques. A significant improvement in the measurement quality is achieved using energy-analyzed detection. Energy-analyzed detection reduces the scattering background from silicon by nearly an order of magnitude, and from fluids such as air and liquids by smaller but significant factors. Combining thin liquid reservoirs with energy-analyzed detection and the high flux of the CANDOR polychromatic reflectometer at the NIST Center for Neutron Research, a background-subtracted neutron reflectivity smaller than 10 −8 from a liquid cell sample is reported.
A design for a radio frequency (RF) neutron spin flipper obtained from magneto-static and neutron spin transport simulations is presented. The RF flipper constructed from this design provides a flipping probability of 0.999 or better for a beam size 6 cm wide and 15 cm high and a wavelength band between 0.4 and 0.6 nm. Three permanent magnet guide field sections with air gaps provide a linear field gradient along the beam propagation direction over a large cross-sectional area. An RF oscillator based on coupling the resonant coil of a Hartley oscillator to the excitation coil was developed, which provides a higher current and, thereby, a larger RF amplitude, as compared to a conventional RF power amplifier. Two opaque He3 neutron spin filters were employed to measure the flipping probability of the flipper with very high precision. A spatially uniform flipping probability of 0.9995(2) or higher was measured over the large cross-sectional area neutron guide. This RF neutron spin flipper will be employed in a polychromatic beam reflectometer at the National Institute of Standards and Technology Center for Neutron Research. This design can be applied to other polarized neutron instruments or applications requiring a very high continuous flipping probability of the neutron spin for a large cross-sectional area beam.
A 6LiF:ZnS(Ag)-based cold neutron detector with wavelength shifting (WLS) fibers and Silicon photomultiplier (SiPM) photodetector was developed at the NIST Center for Neutron Research. For neutron scattering applications at the NCNR, detector false positives severely diminish the quality of very faint neutron scatter patterns. Thermal noise generated by the SiPM significantly increases the likelihood of false positives by the detector/discriminator. This article describes and evaluates a digital real-time algorithm implemented on a field programmable gate array (FPGA) which quickly differentiates SiPM thermal noise and noise pulse pile-up from neutron signals. The algorithm reduces deadtime spent on examining noise pulses as well as reduces the number of false positives.
A (LiF)-Li-6:ZnS(Ag) based cold neutron detector with wavelength shifting (WLS) fibers and SiPM photodetector was developed at the NIST Center for Neutron Research for the CANDoR instrument (Chromatic Analysis Neutron Diffractometer or Reflectometer). The scintillation response of ZnS(Ag) to Li-6 fission products is a long and irregular delayed fluorescence lasting more than 50 mu s. To wait as long as 60 mu s for complete fluorescence decay would impose an unreasonably long deadtime to the system and would severely limit the count rate of this detector. A real-time algorithm was implemented to compensate for the long fluorescence decay, reducing but not eliminating sensitivity for a 60 mu s period. This greatly reduces the deadtime to approximately 3 mu s compared to imposing a 60 mu s hold-off time, while also achieving a double-count fraction (counting the same event multiple times) below 1E-4. Timestamping capabilities of the detector system were used to compile arrival time statistics. Comparisons of the measured arrival time statistics with Poisson arrival statistics illustrates features in the fluorescence compensation algorithm and enables the calculation of deadtime and double-count fraction.
A 6LiF:ZnS(Ag) based cold neutron detector with wavelength shifting (WLS) fibers and SiPM photodetector was developed at the NIST Center for Neutron Research for the CANDoR instrument (Chromatic Analysis Neutron Diffractometer or Reflectometer). A series of detectors were irradiated with neutron doses ranging between 1E+11 n/cm2 to 6E+12 n/cm2. It was found that the neutron absorbing 6Li isotope was not measurably depleted, but the photonic yield of the detector deteriorated with increasing neutron dose. Photonic yields were compared before and after neutron exposure by comparing pulse energy spectrum photopeaks before and after exposure. A typical detector used in the CANDoR instrument is expected to withstand a cumulative cold neutron dose of at least 1E+12 n/cm2 before degrading to an unfit state. The component parts of the detector could not be separated, so the degradation of the bulk scintillator and WLS fibers could not be gauged separately.
Neutron reflectometry (NR) is a powerful method for looking at the structures of multilayered thin films, including biomolecules on surfaces, particularly proteins at lipid interfaces. The spatial resolution of the film structure obtained through an NR experiment is limited by the maximum wavevector transfer at which the reflectivity can be measured. This maximum is in turn determined primarily by the scattering background, e.g. from incoherent scattering from a liquid reservoir or inelastic scattering from cell materials. Thus, reduction of scattering background is an important part of improving the spatial resolution attainable in NR measurements. Here, the background field generated by scattering from a thin liquid reservoir on a monochromatic reflectometer is measured and calculated. It is shown that background subtraction utilizing the entire background field improves data modeling and reduces experimental uncertainties associated with localized background subtraction.
We used Gaussian separation and receiver operating characteristic (ROC) curves to optimize the neutron sensitivity and gamma rejection of an ultra-thin 6 LiF:ZnS(Ag)-scintillator-based neutron detector paired with a silicon photomultiplier (SiPM). We recorded the waveforms while operating the detector in a monochromatic cold neutron beam and in the presence of isotopic 137 Cs and 60 Co gamma sources. We used a two-window charge comparison (CC) pulse-shape discrimination (PSD) technique to distinguish the neutron capture events from other types of signals. By feeding the recorded waveforms through variants of this algorithm, it was possible to optimize the duration of the integration windows [(0-100 ns) for the prompt window and (100-2300 ns)] for the delayed window. We then computed the detector's ROC curve from waveform recordings and compared that with the experimental performance. We also used this procedure to compare a series of detector configurations to select the optimal bias voltage for the SiPM photosensor.
A framework based on Bayesian statistics and information theory is developed to optimize the design of surface-sensitive reflectometry experiments. The method applies to model-based reflectivity data analysis, uses simulated reflectivity data and is capable of optimizing experiments that probe a sample under more than one condition. After presentation of the underlying theory and its implementation, the framework is applied to exemplary test problems for which the information gain ΔH is determined. Reflectivity data are simulated for the current generation of neutron reflectometers at the NIST Center for Neutron Research. However, the simulation can be easily modified for X-ray or neutron instruments at any source. With application to structural biology in mind, this work explores the dependence of ΔH on the scattering length density of aqueous solutions in which the sample structure is bathed, on the counting time and on the maximum momentum transfer of the measurement. Finally, the impact of a buried magnetic reference layer on ΔH is investigated.
Neutron reflectometry (NR) is a powerful technique for probing the structure of lipid bilayer membranes and membrane-associated proteins. Measurements of the specular neutron reflectivity as a function of momentum transfer can be performed in aqueous environments, and inversion of the resulting reflectivity data yields structural profiles along the membrane normal with a spatial resolution approaching a fraction of a nanometer. With the inherent ability of the neutron to penetrate macroscopic distances through surrounding material, neutron reflectivity measurements provide unique structural information on biomimetic, fully hydrated model membranes and associated proteins under physiological conditions. A particular strength of NR is in the characterization of structurally and conformationally flexible peripheral membrane proteins. The unique ability of neutron scattering to differentiate protium from selectively substituted deuterium enables the resolution of individual constituents of membrane-bound protein-protein complexes. Integrative modeling strategies that supplement the low-resolution reflectometry data with complementary experimental and computational information yield high-resolution threedimensional models of membrane-bound protein structures.
In the analysis of neutron scattering measurements of condensed matter structure, it normally suffices to treat the incident and scattered neutron beams as if composed of incoherent distributions of plane waves with wavevectors of different magnitudes and directions which are taken to define an instrumental resolution. However, despite the wide-ranging applicability of this conventional treatment, there are cases in which the wave function of an individual neutron in the beam must be described more accurately by a spatially localized packet, in particular with respect to its transverse extent normal to its mean direction of propagation. One such case involves the creation of orbital angular momentum (OAM) states in a neutron via interaction with a material device of a given size. It is shown in the work reported here that there exist two distinct measures of coherence of special significance and utility for describing neutron beams in scattering studies of materials in general. One measure corresponds to the coherent superposition of basis functions and their wavevectors which constitute each individual neutron packet state function whereas the other measure can be associated with an incoherent distribution of mean wavevectors of the individual neutron packets in a beam. Both the distribution of the mean wavevectors of individual packets in the beam as well as the wavevector components of the superposition of basis functions within an individual packet can contribute to the conventional notion of instrumental resolution. However, it is the transverse spatial extent of packet wavefronts alone that determines the area within which a coherent scattering process can occur in the first place. This picture is shown to be consistent with standard quantum theory. It is also demonstrated that these two measures of coherence can be distinguished from one another experimentally.
We report the detection and quantification of nuclear spin incoherent scattering from hydrogen occupying interstitial sites in a thin film of vanadium. The neutron wave field is enhanced in a quantum resonator with magnetically switchable boundaries. Our results provide a pathway for the study of dynamics at surfaces and in ultrathin films using inelastic and/or quasielastic neutron scattering methods.
We describe the design, fabrication, and performance of an energy analyzing detector package for cold neutron spectrometers at the NIST Center for Neutron Research (NCNR). The detector package consists of arrays of highly oriented pyrolytic graphite crystals set at takeoff angles corresponding to different neutron energies. Neutrons incident down the array will be selected out by the appropriate crystal and directed onto an associated neutron detector. The arrays are capable of binning neutrons into one of 54 bins over an energy range of 2.29 meV to 5.11 meV. We describe theory of operation, the development of a highly efficient ultrathin neutron sensor, and the development of the arrays themselves. We present preliminary results for this detector array along with a mature design of the scintillator neutron detector. We also present enhancements we are pursuing prior to deployment of this technology.
We describe the process of selecting a silicon photomultiplier (SiPM) as the light sensor for an ultrathin (≈2 mm) highly efficient cold neutron detector. The neutron detector consists of 6LiF:ZnS(Ag) scintillator in which wavelength shifting (WLS) fibers have been embedded. The WLS fibers conduct the scintillation light out from the scintillator to the SiPM photosensor. In addition to the many benefits of using silicon photomultipliers as photosensors (low cost, compact size, insensitivity to magnetic fields), their selection also presents many challenges (thermally induced dark noise, delayed cross talk, afterpulsing, etc) which are not shared by traditional photomultiplier tubes. In this work, we discuss the considerations for the selection of the appropriate silicon photomultiplier to achieve the best net neutron sensitivity and gamma ray discrimination. Important characteristics for these devices include short recovery time (≈35 ns), high photodetection efficiency (>30% at the target wavelength), low thermal noise (<35 kHz mm−2 at ambient temperatures), and low crosstalk.
A new cold neutron detector has been developed at the NIST Center for Neutron Research (NCNR) for the CANDoR (Chromatic Analysis Neutron Diffractometer or Reflectometer) project. Geometric and performance constraints dictate that this detector be exceptionally thin (similar to 2 mm). For this reason, the design of the detector consists of a (LiF)-Li-6:ZnS(Ag) scintillator with embedded wavelength shifting (WLS) fibers. We used the GEANT4 package to simulate neutron capture and light transport in the detector to optimize the composition and arrangement of materials to satisfy the competing requirements of high neutron capture probability and light production and transport. In the process, we have developed a method for predicting light collection and total neutron detection efficiency for different detector configurations. The simulation was performed by adjusting crucial parameters such as the scintillator stoichiometry, light yield, component grain size, WLS fiber geometry, and reflectors at the outside edges of the scintillator volume. Three different detector configurations were fabricated and their test results were correlated with the simulations. Through this correlation we have managed to find a common photon threshold for the different detector configurations which was then used to simulate and predict the efficiencies for many other detector configurations. New detectors that have been fabricated based on simulation results yielding the desired sensitivity of 90% for 3.27 meV (5 angstrom) cold neutrons. The simulation has proven to be a useful tool by dramatically reducing the development period and the required number of detector prototypes. It can be used to test new designs with different thicknesses and different target neutron energies.