Abstract In efforts to prevent extinction, resource managers are often tasked with increasing genetic diversity in a population of concern to prevent inbreeding depression or improve adaptive potential in a changing environment. The assumption that all small populations require measures to increase their genetic diversity may be unwarranted, and limited resources for conservation may be better utilized elsewhere. We test this assumption in a case study focused on the peregrine falcon (Falco peregrinus), a cosmopolitan circumpolar species with 19 named subspecies. We used whole‐genome resequencing to generate over two million single nucleotide polymorphisms (SNPs) from multiple individuals of all peregrine falcon subspecies. Our analyses revealed extensive variation among subspecies, with many island‐restricted and nonmigratory populations possessing lower overall genomic diversity, elevated inbreeding coefficients (FROH)—among the highest reported, and extensive runs of homozygosity (ROH) compared to mainland and migratory populations. Similarly, the majority of subspecies that are either nonmigratory or restricted to islands show a much longer history of low effective population size (Ne). While mutational load analyses indicated an increased proportion of homozygous‐derived deleterious variants (i.e., drift load) among nonmigrant and island populations compared to those that are migrant or reside on the mainland, no significant differences in the proportion of heterozygous deleterious variants (i.e., inbreeding load) was observed. Our results provide evidence that high levels of inbreeding may not be an existential threat for some populations or taxa. Additional factors such as the timing and severity of population declines are important to consider in management decisions about extinction potential.

Subspecies relationships within the peregrine falcon (Falco peregrinus) have been long debated because of the polytypic nature of melanin-based plumage characteristics used in subspecies designations and potential differentiation of local subpopulations due to philopatry. In North America, understanding the evolutionary relationships among subspecies may have been further complicated by the introduction of captive bred peregrines originating from non-native stock, as part of recovery efforts associated with mid 20th century population declines resulting from organochloride pollution. Alaska hosts all three nominal subspecies of North American peregrine falcons-F. p. tundrius, anatum, and pealei-for which distributions in Alaska are broadly associated with nesting locales within Arctic, boreal, and south coastal maritime habitats, respectively. Unlike elsewhere, populations of peregrine falcon in Alaska were not augmented by captive-bred birds during the late 20th century recovery efforts. Population genetic differentiation analyses of peregrine populations in Alaska, based on sequence data from the mitochondrial DNA control region and fragment data from microsatellite loci, failed to uncover genetic distinction between populations of peregrines occupying Arctic and boreal Alaskan locales. However, the maritime subspecies, pealei, was genetically differentiated from Arctic and boreal populations, and substructured into eastern and western populations. Levels of interpopulational gene flow between anatum and tundrius were generally higher than between pealei and either anatum or tundrius. Estimates based on both marker types revealed gene flow between augmented Canadian populations and unaugmented Alaskan populations. While we make no attempt at formal taxonomic revision, our data suggest that peregrine falcons occupying habitats in Alaska and the North Pacific coast of North America belong to two distinct regional groupings-a coastal grouping (pealei) and a boreal/Arctic grouping (currently anatum and tundrius)-each comprised of discrete populations that are variously intra-regionally connected.

How populations and communities reassemble following disturbances are affected by a number of factors, with the arrival order of founding populations often having a profound influence on later populations and community structure. Kasatochi Island is a small volcano located in the central Aleutian archipelago that erupted violently August 8, 2008, sterilizing the island of avian biodiversity. Prior to the eruption, Kasatochi was the center of abundance for breeding seabirds in the central Aleutian Islands and supported several breeding pairs of peregrine falcons (Falco peregrinus). We examined the reestablishment of peregrine falcons on Kasatochi by evaluating the genetic relatedness among legacy samples collected in 2006 to those collected posteruption and to other falcons breeding along the archipelago. No genotypes found in posteruption samples were identical to genotypes collected from pre-eruption samples. However, genetic analyses suggest that individuals closely related to peregrine falcons occupying pre-eruption Kasatochi returned following the eruption and successfully fledged young; thus, a genetic legacy of pre-eruption falcons was present on posteruption Kasatochi Island. We hypothesize that the rapid reestablishment of peregrine falcons on Kasatochi was likely facilitated by behavioral characteristics of peregrine falcons breeding in the Aleutian Islands, such as year-round residency and breeding site fidelity, the presence of an abundant food source (seabirds), and limited vegetation requirements by seabirds and falcons.

The ability to successfully colonize and persist in diverse environments likely requires broad morphological and behavioral plasticity and adaptability, and this may partly explain why the Peregrine Falcon (Falco peregrinus) exhibits a large range of morphological characteristics across their global distribution. Regional and local differences within Peregrine Falcons were sufficiently variable that 75 subspecies have been described; many were subsumed, and currently 19 are generally recognized. We used sequence information from the control region of the mitochondrial genome to test for concordance between genetic structure and representatives of 12 current subspecies and from two areas where subspecies distributions overlap. Haplotypes were broadly shared among subspecies, and all geographic locales shared a widely distributed common haplotype (FalconCR2). Haplotypes were distributed in a star-like phylogeny, consistent with rapid expansion of a recently derived species, with observed genetic patterns congruent with incomplete lineage sorting and/or differential rates of evolution on morphology and neutral genetic characters. Hierarchical analyses of molecular variance did not uncover genetic partitioning at the continental level, despite strong population-level structure (F-ST = 0.228). Similar analyses found weak partitioning, albeit significant, among subspecies (F-CT = 0.138). All reconstructions placed the hierofalcons' (Gyrfalcon [F. rusticolus] and Saker Falcon [F. cherrug]) haplotypes in a well-supported clade either basal or unresolved with respect to the Peregrine Falcon. In addition, haplotypes representing Taita Falcon (F. fasciinucha) were placed within the Peregrine Falcon clade. Received 11 August 2011, accepted 26 September 2012.

Gape morphology has been linked to feeding and breeding ecology in raptors, according to the ingestion rate hypothesis. Mammal feeding raptors have larger gapes, allowing them to ingest prey more rapidly than bird feeders, which have evolved smaller average body sizes and gapes to capture more agile prey. One highly derived raptor, however, the Bat Hawk (Macheiramphus alcinus), specializes on colonial bats and swiftlets concentrated daily in a limited temporal window by capturing and swallowing them whole in flight. We hypothesized that the gape of the Bat Hawk evolved to feed rapidly on agile vertebrates limited temporally. We predicted that the gape of the Bat Hawk would be significantly larger than the gape of other raptors, more closely resembling the gapes of swifts (Apodidae), swallows (Hirundinidae), and goatsuckers (Caprimulgiformes). We measured gape area of the lower mandible in museum specimens representing 138 bird species in six orders. We also compared gape area by prey type in over 100 raptor species in three orders. We predicted that insectivorous raptors would exhibit gapes similar to mammal feeders but would differ from bird feeders because insects are not agile prey. The Bat Hawk had the largest gape of any raptor and more closely resembled the gape of insectivorous birds, which also swallow prey whole in flight. The evolution of an enlarged gape may have permitted the Bat Hawk to exploit a previously unrealized ecological niche. Gapes of bird feeding raptors were smaller than in mammal and insect feeders, supporting the ingestion rate hypothesis.

We compared levels of genetic diversity and isolation among peregrine falcons Falco peregrinus from two South Pacific island complexes (Fiji and Vanuatu: F. p. nesiotes), relative to other island and mainland populations. Fragment data from 12 microsatellite loci and sequence information from the control region of the mitochondrial DNA indicated levels of genetic variation in the South Pacific populations were lower than other island and mainland populations. Indeed, diversity varied from extremely low (Vanuatu) to completely absent (Fiji). We find little support for a hypothesis that populations on Fiji or Vanuatu were colonized via Australia. The complete lack of polymorphism in peregrine falcons of Fiji is remarkable, and to our knowledge has not been observed in a natural avian population. This lack of polymorphism, and the inability to test for decrease in polymorphism using museum samples, precludes testing whether the lack of genetic diversity in the population on Fiji is due to a recent bottleneck, or sustained isolation over evolutionary time. Increased fertility in eggs of Fiji peregrines upon outbreeding with males from other areas is consistent with inbreeding depression within a population typified by heterozygote deficiency.

Ring-necked pheasants (Phasianus colchicus) are able to store dietary calcium as medullary bone, which they may mobilize for future eggshell synthesis. We define this mechanism as calcium-loading. Previous experiments on pheasants conducted to document the importance of calcium in limiting distribution did not account for calcium-loading. We hypothesized that calcium-loading could override experimental calcium treatments of the diet. We measured egg production, egg characteristics, and femoral mineral content for pheasants that were not calcium-loaded on 7 diets differing in calcium from 0.2% to 4.5% and compared these results to a similar study on calcium-loaded pheasants. We predicted that calcium-loaded pheasants would produce more eggs than those that were not calcium-loaded. We also predicted that there would be no significant difference between femur ash fractions in non-calcium-loaded pheasants, but that the ash fraction in calcium-loaded pheasants would differ significantly between the beginning and end of the experiment. Egg production was higher in calcium-loaded pheasants above 2% dietary calcium. Femur ash fraction was not different in non-calcium-loaded pheasants but differed significantly before and after the experiment and between high (>2%) and low (<2%) dietary levels in calcium-loaded pheasants. Calcium-loading may account for short-term persistence of captive pheasants introduced on calcium-poor soils, followed by their eventual population failure. Managers may improve survival of captive pheasants before introduction by surveying habitat for adequate calcium and by calcium-loading.

The South-East Asian subspecies of Peregrine Falcon Falco peregrinus ernesti is among the least known of this cosmopolitan species, with no confirmed reports of its nesting in Peninsular Malaysia until 1996. Between October 2003 and May 2005, we conducted a field survey for breeding sites across c.20,000 km2 of Peninsular Malaysia. Combining the survey results with sites found by others yielded a total of 15 known pairs, with six others strongly suspected. All reproductive behaviours, from courtship to the fledging of juveniles, were observed. Based on ecological requirements (cliff habitat and observed density), we conducted an intensive study of topographical and geological maps covering a quarter of Peninsular Malaysia. We suggest there may be at least 70-80 pairs in 135,000 km2 of Peninsular Malaysia. Potential threats include excessive quarrying of limestone and the use of pesticides. The impact of these two factors, as well as the true distribution and abundance, need further study.